Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf9P20334 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf9P20334 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.43■□□□□ 0.54
Tnfrsf9P20334 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Tnfrsf9P20334 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf9P20334 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Tnfrsf9P20334 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf9P20334 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf9P20334 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf9P20334 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf9P20334 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf9P20334 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf9P20334 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf9P20334 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.41■□□□□ 0.54
Tnfrsf9P20334 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Tnfrsf9P20334 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf9P20334 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Tnfrsf9P20334 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf9P20334 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.4■□□□□ 0.54
Tnfrsf9P20334 Mir3960-201ENSMUST00000198213 73 ntBASIC18.4■□□□□ 0.54
Tnfrsf9P20334 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf9P20334 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf9P20334 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf9P20334 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.39■□□□□ 0.53
Tnfrsf9P20334 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf9P20334 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf9P20334 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf9P20334 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf9P20334 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf9P20334 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf9P20334 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf9P20334 Gm45364-201ENSMUST00000210883 159 ntBASIC18.38■□□□□ 0.53
Tnfrsf9P20334 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.38■□□□□ 0.53
Tnfrsf9P20334 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf9P20334 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tnfrsf9P20334 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Tnfrsf9P20334 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.37■□□□□ 0.53
Tnfrsf9P20334 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.37■□□□□ 0.53
Tnfrsf9P20334 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf9P20334 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf9P20334 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf9P20334 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf9P20334 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Tnfrsf9P20334 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf9P20334 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf9P20334 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.35■□□□□ 0.53
Tnfrsf9P20334 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.35■□□□□ 0.53
Tnfrsf9P20334 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.35■□□□□ 0.53
Tnfrsf9P20334 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf9P20334 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf9P20334 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf9P20334 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf9P20334 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf9P20334 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf9P20334 Gm22567-201ENSMUST00000175542 342 ntBASIC18.34■□□□□ 0.53
Tnfrsf9P20334 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf9P20334 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf9P20334 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tnfrsf9P20334 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tnfrsf9P20334 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Tnfrsf9P20334 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf9P20334 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.33■□□□□ 0.52
Tnfrsf9P20334 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Tnfrsf9P20334 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.32■□□□□ 0.52
Tnfrsf9P20334 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf9P20334 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tnfrsf9P20334 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tnfrsf9P20334 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf9P20334 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf9P20334 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf9P20334 Gm14523-201ENSMUST00000117260 558 ntBASIC18.29■□□□□ 0.52
Tnfrsf9P20334 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf9P20334 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf9P20334 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf9P20334 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf9P20334 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf9P20334 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
Tnfrsf9P20334 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf9P20334 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf9P20334 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf9P20334 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf9P20334 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Tnfrsf9P20334 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf9P20334 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf9P20334 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Tnfrsf9P20334 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf9P20334 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf9P20334 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf9P20334 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf9P20334 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf9P20334 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.25■□□□□ 0.51
Tnfrsf9P20334 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf9P20334 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf9P20334 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf9P20334 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf9P20334 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf9P20334 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.24■□□□□ 0.51
Tnfrsf9P20334 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Tnfrsf9P20334 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf9P20334 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 181.3 ms