Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccl3P10855 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccl3P10855 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccl3P10855 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccl3P10855 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccl3P10855 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccl3P10855 Terc-201ENSMUST00000082862 423 ntBASIC20.74■□□□□ 0.91
Ccl3P10855 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccl3P10855 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccl3P10855 Gm10420-201ENSMUST00000121713 882 ntBASIC20.73■□□□□ 0.91
Ccl3P10855 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccl3P10855 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccl3P10855 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.72■□□□□ 0.91
Ccl3P10855 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccl3P10855 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccl3P10855 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ccl3P10855 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccl3P10855 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Ccl3P10855 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccl3P10855 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Ccl3P10855 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccl3P10855 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.71■□□□□ 0.91
Ccl3P10855 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.71■□□□□ 0.91
Ccl3P10855 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccl3P10855 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ccl3P10855 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccl3P10855 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccl3P10855 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccl3P10855 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ccl3P10855 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccl3P10855 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccl3P10855 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.69■□□□□ 0.9
Ccl3P10855 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccl3P10855 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ccl3P10855 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccl3P10855 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccl3P10855 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccl3P10855 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.68■□□□□ 0.9
Ccl3P10855 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccl3P10855 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.67■□□□□ 0.9
Ccl3P10855 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ccl3P10855 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccl3P10855 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccl3P10855 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Ccl3P10855 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccl3P10855 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccl3P10855 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccl3P10855 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccl3P10855 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.64■□□□□ 0.89
Ccl3P10855 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccl3P10855 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccl3P10855 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccl3P10855 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccl3P10855 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccl3P10855 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ccl3P10855 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccl3P10855 Gm5921-201ENSMUST00000075898 882 ntBASIC20.62■□□□□ 0.89
Ccl3P10855 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.61■□□□□ 0.89
Ccl3P10855 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccl3P10855 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccl3P10855 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccl3P10855 Gm5812-201ENSMUST00000061073 957 ntBASIC20.6■□□□□ 0.89
Ccl3P10855 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccl3P10855 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccl3P10855 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccl3P10855 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ccl3P10855 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccl3P10855 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccl3P10855 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
Ccl3P10855 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccl3P10855 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ccl3P10855 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ccl3P10855 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ccl3P10855 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.58■□□□□ 0.88
Ccl3P10855 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccl3P10855 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ccl3P10855 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.57■□□□□ 0.88
Ccl3P10855 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccl3P10855 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccl3P10855 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ccl3P10855 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccl3P10855 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccl3P10855 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccl3P10855 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccl3P10855 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccl3P10855 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccl3P10855 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccl3P10855 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccl3P10855 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccl3P10855 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccl3P10855 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccl3P10855 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccl3P10855 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.52■□□□□ 0.88
Ccl3P10855 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccl3P10855 Gm44428-201ENSMUST00000204474 874 ntBASIC20.52■□□□□ 0.88
Ccl3P10855 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.52■□□□□ 0.88
Ccl3P10855 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccl3P10855 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.51■□□□□ 0.87
Ccl3P10855 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccl3P10855 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms