Protein–RNA interactions for Protein: P10404

MLV-related proviral Env polyprotein, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P10404 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.4■□□□□ 0.7
P10404 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P10404 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
P10404 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P10404 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
P10404 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P10404 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P10404 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P10404 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P10404 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
P10404 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
P10404 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
P10404 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P10404 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.37■□□□□ 0.69
P10404 Gm7432-201ENSMUST00000210343 879 ntBASIC19.36■□□□□ 0.69
P10404 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P10404 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P10404 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P10404 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
P10404 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P10404 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P10404 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P10404 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P10404 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.34■□□□□ 0.69
P10404 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
P10404 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.34■□□□□ 0.69
P10404 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.34■□□□□ 0.69
P10404 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
P10404 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P10404 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
P10404 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P10404 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
P10404 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.33■□□□□ 0.69
P10404 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
P10404 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
P10404 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.33■□□□□ 0.68
P10404 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
P10404 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P10404 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P10404 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
P10404 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.32■□□□□ 0.68
P10404 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.32■□□□□ 0.68
P10404 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.32■□□□□ 0.68
P10404 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
P10404 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P10404 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P10404 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P10404 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
P10404 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P10404 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.3■□□□□ 0.68
P10404 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P10404 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
P10404 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
P10404 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
P10404 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P10404 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
P10404 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.29■□□□□ 0.68
P10404 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P10404 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P10404 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
P10404 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P10404 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.28■□□□□ 0.68
P10404 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P10404 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
P10404 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P10404 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
P10404 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
P10404 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P10404 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
P10404 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
P10404 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
P10404 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
P10404 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P10404 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
P10404 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
P10404 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P10404 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P10404 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P10404 Gm11599-201ENSMUST00000118720 878 ntBASIC19.25■□□□□ 0.67
P10404 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
P10404 Gm37136-201ENSMUST00000194368 194 ntBASIC19.25■□□□□ 0.67
P10404 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P10404 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
P10404 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P10404 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
P10404 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
P10404 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P10404 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
P10404 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
P10404 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
P10404 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P10404 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
P10404 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
P10404 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
P10404 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
P10404 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.22■□□□□ 0.67
P10404 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P10404 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P10404 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P10404 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms