Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.51■□□□□ 0.87
P06344 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
P06344 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
P06344 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
P06344 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
P06344 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
P06344 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
P06344 Gm45364-201ENSMUST00000210883 159 ntBASIC20.49■□□□□ 0.87
P06344 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.49■□□□□ 0.87
P06344 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
P06344 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
P06344 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
P06344 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
P06344 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
P06344 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
P06344 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.47■□□□□ 0.87
P06344 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.47■□□□□ 0.87
P06344 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.47■□□□□ 0.87
P06344 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
P06344 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
P06344 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
P06344 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
P06344 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
P06344 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
P06344 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
P06344 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
P06344 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
P06344 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
P06344 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
P06344 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
P06344 Mir6538-201ENSMUST00000183713 110 ntBASIC20.44■□□□□ 0.86
P06344 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
P06344 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
P06344 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
P06344 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
P06344 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.43■□□□□ 0.86
P06344 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
P06344 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
P06344 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
P06344 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
P06344 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
P06344 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
P06344 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.41■□□□□ 0.86
P06344 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
P06344 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.41■□□□□ 0.86
P06344 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
P06344 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
P06344 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
P06344 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
P06344 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
P06344 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
P06344 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
P06344 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
P06344 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
P06344 Scarna2-201ENSMUST00000157560 414 ntBASIC20.39■□□□□ 0.85
P06344 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
P06344 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
P06344 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
P06344 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
P06344 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
P06344 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.38■□□□□ 0.85
P06344 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
P06344 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P06344 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
P06344 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.37■□□□□ 0.85
P06344 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P06344 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P06344 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P06344 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
P06344 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
P06344 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P06344 Gm9806-201ENSMUST00000051080 552 ntBASIC20.36■□□□□ 0.85
P06344 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
P06344 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
P06344 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P06344 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P06344 Gm9812-201ENSMUST00000061934 968 ntBASIC20.35■□□□□ 0.85
P06344 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P06344 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.34■□□□□ 0.85
P06344 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.34■□□□□ 0.85
P06344 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
P06344 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.34■□□□□ 0.85
P06344 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.34■□□□□ 0.85
P06344 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P06344 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P06344 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P06344 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
P06344 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
P06344 Gm11687-201ENSMUST00000118911 886 ntBASIC20.33■□□□□ 0.85
P06344 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
P06344 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.33■□□□□ 0.84
P06344 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
P06344 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
P06344 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P06344 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P06344 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
P06344 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
P06344 Gm16437-201ENSMUST00000025669 507 ntBASIC20.31■□□□□ 0.84
P06344 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P06344 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms