Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.19■□□□□ 0.98
P06336 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.19■□□□□ 0.98
P06336 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
P06336 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.18■□□□□ 0.98
P06336 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P06336 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
P06336 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P06336 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P06336 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
P06336 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.17■□□□□ 0.98
P06336 Mir3960-201ENSMUST00000198213 73 ntBASIC21.17■□□□□ 0.98
P06336 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
P06336 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
P06336 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
P06336 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.16■□□□□ 0.98
P06336 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.15■□□□□ 0.98
P06336 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
P06336 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
P06336 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
P06336 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
P06336 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
P06336 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
P06336 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
P06336 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.14■□□□□ 0.97
P06336 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
P06336 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
P06336 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.13■□□□□ 0.97
P06336 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
P06336 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
P06336 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
P06336 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
P06336 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
P06336 Gm6311-201ENSMUST00000073790 878 ntBASIC21.12■□□□□ 0.97
P06336 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
P06336 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.12■□□□□ 0.97
P06336 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
P06336 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
P06336 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
P06336 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
P06336 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
P06336 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.1■□□□□ 0.97
P06336 Gm45364-201ENSMUST00000210883 159 ntBASIC21.1■□□□□ 0.97
P06336 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
P06336 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
P06336 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.09■□□□□ 0.97
P06336 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
P06336 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.08■□□□□ 0.97
P06336 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
P06336 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
P06336 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.07■□□□□ 0.96
P06336 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
P06336 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P06336 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.06■□□□□ 0.96
P06336 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
P06336 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.06■□□□□ 0.96
P06336 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
P06336 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
P06336 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
P06336 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P06336 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P06336 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
P06336 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P06336 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P06336 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
P06336 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
P06336 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.05■□□□□ 0.96
P06336 Gm9812-201ENSMUST00000061934 968 ntBASIC21.04■□□□□ 0.96
P06336 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P06336 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
P06336 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
P06336 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
P06336 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
P06336 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
P06336 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
P06336 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
P06336 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
P06336 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
P06336 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.02■□□□□ 0.96
P06336 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
P06336 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
P06336 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
P06336 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P06336 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
P06336 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.01■□□□□ 0.95
P06336 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
P06336 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.01■□□□□ 0.95
P06336 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P06336 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P06336 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21■□□□□ 0.95
P06336 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
P06336 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21■□□□□ 0.95
P06336 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21■□□□□ 0.95
P06336 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21■□□□□ 0.95
P06336 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
P06336 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P06336 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P06336 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
P06336 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
P06336 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P06336 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms