Protein–RNA interactions for Protein: P04945

Ig kappa chain V-VI region NQ2-6.1, mousemouse

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04945 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P04945 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P04945 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P04945 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
P04945 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
P04945 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
P04945 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.83■□□□□ 0.76
P04945 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
P04945 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P04945 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P04945 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
P04945 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
P04945 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.81■□□□□ 0.76
P04945 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
P04945 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P04945 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
P04945 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
P04945 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
P04945 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
P04945 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
P04945 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
P04945 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
P04945 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.79■□□□□ 0.76
P04945 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
P04945 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
P04945 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
P04945 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.78■□□□□ 0.76
P04945 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.78■□□□□ 0.76
P04945 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
P04945 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
P04945 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
P04945 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.77■□□□□ 0.76
P04945 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
P04945 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
P04945 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
P04945 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
P04945 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
P04945 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
P04945 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
P04945 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
P04945 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
P04945 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
P04945 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
P04945 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
P04945 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
P04945 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
P04945 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.73■□□□□ 0.75
P04945 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.73■□□□□ 0.75
P04945 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
P04945 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
P04945 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
P04945 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
P04945 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
P04945 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
P04945 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.72■□□□□ 0.75
P04945 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
P04945 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
P04945 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.71■□□□□ 0.75
P04945 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
P04945 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
P04945 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
P04945 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
P04945 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
P04945 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
P04945 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
P04945 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
P04945 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
P04945 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
P04945 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
P04945 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
P04945 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
P04945 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
P04945 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
P04945 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
P04945 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
P04945 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
P04945 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
P04945 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
P04945 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.68■□□□□ 0.74
P04945 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
P04945 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.68■□□□□ 0.74
P04945 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
P04945 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
P04945 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
P04945 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
P04945 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
P04945 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
P04945 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
P04945 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P04945 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
P04945 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
P04945 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
P04945 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.64■□□□□ 0.73
P04945 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
P04945 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
P04945 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
P04945 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
P04945 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
P04945 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.63■□□□□ 0.73
P04945 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms