Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
P01852 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
P01852 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
P01852 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
P01852 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.89■□□□□ 0.93
P01852 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
P01852 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
P01852 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
P01852 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
P01852 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
P01852 Gm6311-201ENSMUST00000073790 878 ntBASIC20.88■□□□□ 0.93
P01852 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
P01852 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
P01852 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P01852 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P01852 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.87■□□□□ 0.93
P01852 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
P01852 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.87■□□□□ 0.93
P01852 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.86■□□□□ 0.93
P01852 Mir3960-201ENSMUST00000198213 73 ntBASIC20.86■□□□□ 0.93
P01852 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
P01852 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
P01852 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.85■□□□□ 0.93
P01852 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.85■□□□□ 0.93
P01852 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.85■□□□□ 0.93
P01852 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
P01852 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
P01852 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
P01852 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.84■□□□□ 0.93
P01852 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
P01852 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
P01852 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
P01852 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
P01852 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
P01852 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
P01852 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.82■□□□□ 0.92
P01852 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P01852 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P01852 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.81■□□□□ 0.92
P01852 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
P01852 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
P01852 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P01852 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
P01852 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
P01852 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
P01852 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
P01852 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
P01852 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
P01852 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
P01852 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
P01852 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P01852 Gm45364-201ENSMUST00000210883 159 ntBASIC20.78■□□□□ 0.92
P01852 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P01852 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
P01852 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.77■□□□□ 0.92
P01852 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.77■□□□□ 0.92
P01852 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.77■□□□□ 0.92
P01852 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
P01852 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
P01852 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P01852 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P01852 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.76■□□□□ 0.91
P01852 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
P01852 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
P01852 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
P01852 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
P01852 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
P01852 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
P01852 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
P01852 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
P01852 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
P01852 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
P01852 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
P01852 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P01852 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.72■□□□□ 0.91
P01852 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
P01852 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
P01852 Gm9812-201ENSMUST00000061934 968 ntBASIC20.72■□□□□ 0.91
P01852 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
P01852 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
P01852 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
P01852 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
P01852 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P01852 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P01852 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.71■□□□□ 0.91
P01852 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P01852 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
P01852 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P01852 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P01852 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
P01852 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.7■□□□□ 0.9
P01852 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
P01852 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
P01852 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
P01852 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.69■□□□□ 0.9
P01852 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P01852 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
P01852 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P01852 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P01852 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms