Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Abcd4O89016 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Abcd4O89016 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Abcd4O89016 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Abcd4O89016 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Abcd4O89016 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Abcd4O89016 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Abcd4O89016 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Abcd4O89016 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Abcd4O89016 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abcd4O89016 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abcd4O89016 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abcd4O89016 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.62■□□□□ 0.89
Abcd4O89016 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abcd4O89016 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Abcd4O89016 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Abcd4O89016 Cap2-205ENSMUST00000225824 1634 ntBASIC20.61■□□□□ 0.89
Abcd4O89016 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.61■□□□□ 0.89
Abcd4O89016 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
Abcd4O89016 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.6■□□□□ 0.89
Abcd4O89016 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abcd4O89016 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Abcd4O89016 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.59■□□□□ 0.89
Abcd4O89016 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abcd4O89016 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abcd4O89016 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.59■□□□□ 0.89
Abcd4O89016 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Abcd4O89016 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Abcd4O89016 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Abcd4O89016 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.58■□□□□ 0.88
Abcd4O89016 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Abcd4O89016 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Abcd4O89016 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Abcd4O89016 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Abcd4O89016 Gm45364-201ENSMUST00000210883 159 ntBASIC20.57■□□□□ 0.88
Abcd4O89016 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.57■□□□□ 0.88
Abcd4O89016 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Abcd4O89016 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.56■□□□□ 0.88
Abcd4O89016 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abcd4O89016 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abcd4O89016 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Abcd4O89016 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abcd4O89016 Gm16437-201ENSMUST00000025669 507 ntBASIC20.55■□□□□ 0.88
Abcd4O89016 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abcd4O89016 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Abcd4O89016 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Abcd4O89016 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Abcd4O89016 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Abcd4O89016 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.53■□□□□ 0.88
Abcd4O89016 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Abcd4O89016 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Abcd4O89016 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Abcd4O89016 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Abcd4O89016 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.5■□□□□ 0.87
Abcd4O89016 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Abcd4O89016 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Abcd4O89016 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Abcd4O89016 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.49■□□□□ 0.87
Abcd4O89016 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Abcd4O89016 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Abcd4O89016 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Abcd4O89016 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Abcd4O89016 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Abcd4O89016 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Abcd4O89016 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Abcd4O89016 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Abcd4O89016 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Abcd4O89016 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Abcd4O89016 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Abcd4O89016 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.46■□□□□ 0.87
Abcd4O89016 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.46■□□□□ 0.87
Abcd4O89016 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Abcd4O89016 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Abcd4O89016 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Abcd4O89016 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Abcd4O89016 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.45■□□□□ 0.86
Abcd4O89016 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Abcd4O89016 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Abcd4O89016 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Abcd4O89016 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.43■□□□□ 0.86
Abcd4O89016 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Abcd4O89016 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Abcd4O89016 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Abcd4O89016 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.42■□□□□ 0.86
Abcd4O89016 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Abcd4O89016 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Abcd4O89016 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Abcd4O89016 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.42■□□□□ 0.86
Abcd4O89016 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Abcd4O89016 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Abcd4O89016 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Abcd4O89016 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Abcd4O89016 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Abcd4O89016 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Abcd4O89016 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Abcd4O89016 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Abcd4O89016 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.4■□□□□ 0.86
Abcd4O89016 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Abcd4O89016 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Abcd4O89016 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms