Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Hdac3O88895 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac3O88895 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac3O88895 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac3O88895 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac3O88895 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac3O88895 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac3O88895 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac3O88895 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac3O88895 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.37■□□□□ 0.85
Hdac3O88895 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac3O88895 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac3O88895 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Hdac3O88895 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac3O88895 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.35■□□□□ 0.85
Hdac3O88895 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac3O88895 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac3O88895 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.34■□□□□ 0.85
Hdac3O88895 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac3O88895 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Hdac3O88895 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hdac3O88895 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac3O88895 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.32■□□□□ 0.84
Hdac3O88895 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.32■□□□□ 0.84
Hdac3O88895 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac3O88895 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac3O88895 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Hdac3O88895 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Hdac3O88895 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.32■□□□□ 0.84
Hdac3O88895 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac3O88895 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Hdac3O88895 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Hdac3O88895 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac3O88895 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac3O88895 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac3O88895 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.3■□□□□ 0.84
Hdac3O88895 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.3■□□□□ 0.84
Hdac3O88895 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac3O88895 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac3O88895 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.29■□□□□ 0.84
Hdac3O88895 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hdac3O88895 Particl-201ENSMUST00000205370 1560 ntBASIC20.29■□□□□ 0.84
Hdac3O88895 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Hdac3O88895 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.28■□□□□ 0.84
Hdac3O88895 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac3O88895 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac3O88895 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hdac3O88895 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac3O88895 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac3O88895 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac3O88895 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hdac3O88895 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac3O88895 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.26■□□□□ 0.83
Hdac3O88895 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hdac3O88895 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac3O88895 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Hdac3O88895 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac3O88895 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hdac3O88895 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hdac3O88895 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.24■□□□□ 0.83
Hdac3O88895 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.24■□□□□ 0.83
Hdac3O88895 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.24■□□□□ 0.83
Hdac3O88895 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Hdac3O88895 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Hdac3O88895 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Hdac3O88895 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Hdac3O88895 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.22■□□□□ 0.83
Hdac3O88895 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac3O88895 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac3O88895 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hdac3O88895 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac3O88895 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Hdac3O88895 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac3O88895 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Hdac3O88895 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.21■□□□□ 0.83
Hdac3O88895 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac3O88895 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hdac3O88895 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Hdac3O88895 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Hdac3O88895 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hdac3O88895 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Hdac3O88895 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac3O88895 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac3O88895 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac3O88895 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac3O88895 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac3O88895 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hdac3O88895 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac3O88895 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hdac3O88895 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Hdac3O88895 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac3O88895 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac3O88895 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac3O88895 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Hdac3O88895 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac3O88895 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac3O88895 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac3O88895 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac3O88895 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac3O88895 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 121.4 ms