Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hcn1O88704 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.81■■□□□ 1.08
Hcn1O88704 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hcn1O88704 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hcn1O88704 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.8■■□□□ 1.08
Hcn1O88704 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hcn1O88704 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.8■■□□□ 1.08
Hcn1O88704 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.79■■□□□ 1.08
Hcn1O88704 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
Hcn1O88704 Particl-201ENSMUST00000205370 1560 ntBASIC21.79■■□□□ 1.08
Hcn1O88704 Gm11599-201ENSMUST00000118720 878 ntBASIC21.79■■□□□ 1.08
Hcn1O88704 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.79■■□□□ 1.08
Hcn1O88704 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
Hcn1O88704 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hcn1O88704 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hcn1O88704 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hcn1O88704 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Hcn1O88704 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hcn1O88704 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hcn1O88704 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hcn1O88704 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hcn1O88704 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hcn1O88704 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.77■■□□□ 1.08
Hcn1O88704 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Hcn1O88704 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Hcn1O88704 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hcn1O88704 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hcn1O88704 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Hcn1O88704 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Hcn1O88704 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.75■■□□□ 1.07
Hcn1O88704 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hcn1O88704 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Hcn1O88704 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Hcn1O88704 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Hcn1O88704 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hcn1O88704 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hcn1O88704 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hcn1O88704 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Hcn1O88704 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Hcn1O88704 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hcn1O88704 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Hcn1O88704 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Hcn1O88704 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.71■■□□□ 1.07
Hcn1O88704 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Hcn1O88704 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hcn1O88704 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hcn1O88704 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hcn1O88704 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hcn1O88704 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hcn1O88704 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hcn1O88704 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Hcn1O88704 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hcn1O88704 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hcn1O88704 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Hcn1O88704 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hcn1O88704 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Hcn1O88704 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hcn1O88704 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.65■■□□□ 1.06
Hcn1O88704 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Hcn1O88704 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Hcn1O88704 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Hcn1O88704 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hcn1O88704 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hcn1O88704 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.63■■□□□ 1.05
Hcn1O88704 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hcn1O88704 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Hcn1O88704 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hcn1O88704 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hcn1O88704 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hcn1O88704 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hcn1O88704 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hcn1O88704 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Hcn1O88704 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.6■■□□□ 1.05
Hcn1O88704 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Hcn1O88704 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hcn1O88704 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hcn1O88704 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.59■■□□□ 1.05
Hcn1O88704 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Hcn1O88704 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Hcn1O88704 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hcn1O88704 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Hcn1O88704 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hcn1O88704 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hcn1O88704 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hcn1O88704 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hcn1O88704 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Hcn1O88704 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hcn1O88704 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Hcn1O88704 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hcn1O88704 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hcn1O88704 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Hcn1O88704 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Hcn1O88704 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.56■■□□□ 1.04
Hcn1O88704 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hcn1O88704 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.56■■□□□ 1.04
Hcn1O88704 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hcn1O88704 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.55■■□□□ 1.04
Hcn1O88704 Gm37136-201ENSMUST00000194368 194 ntBASIC21.55■■□□□ 1.04
Hcn1O88704 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hcn1O88704 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms