Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Slc6a20bO88575 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC25.75■■□□□ 1.71
Slc6a20bO88575 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
Slc6a20bO88575 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Slc6a20bO88575 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC25.74■■□□□ 1.71
Slc6a20bO88575 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.74■■□□□ 1.71
Slc6a20bO88575 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Slc6a20bO88575 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Slc6a20bO88575 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
Slc6a20bO88575 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Slc6a20bO88575 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Slc6a20bO88575 AC093043.1-201ENSMUST00000226700 898 ntBASIC25.73■■□□□ 1.71
Slc6a20bO88575 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
Slc6a20bO88575 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Slc6a20bO88575 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Slc6a20bO88575 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC25.71■■□□□ 1.71
Slc6a20bO88575 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC25.71■■□□□ 1.71
Slc6a20bO88575 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Slc6a20bO88575 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Slc6a20bO88575 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Slc6a20bO88575 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Slc6a20bO88575 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Slc6a20bO88575 Terc-201ENSMUST00000082862 423 ntBASIC25.69■■□□□ 1.7
Slc6a20bO88575 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Slc6a20bO88575 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Slc6a20bO88575 AC153911.1-201ENSMUST00000220378 758 ntBASIC25.66■■□□□ 1.7
Slc6a20bO88575 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Slc6a20bO88575 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.65■■□□□ 1.7
Slc6a20bO88575 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.64■■□□□ 1.7
Slc6a20bO88575 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Slc6a20bO88575 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Slc6a20bO88575 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Slc6a20bO88575 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Slc6a20bO88575 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Slc6a20bO88575 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Slc6a20bO88575 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Slc6a20bO88575 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.62■■□□□ 1.69
Slc6a20bO88575 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Slc6a20bO88575 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Slc6a20bO88575 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Slc6a20bO88575 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Slc6a20bO88575 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Slc6a20bO88575 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC25.61■■□□□ 1.69
Slc6a20bO88575 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.61■■□□□ 1.69
Slc6a20bO88575 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Slc6a20bO88575 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Slc6a20bO88575 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Slc6a20bO88575 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Slc6a20bO88575 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Slc6a20bO88575 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Slc6a20bO88575 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Slc6a20bO88575 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Slc6a20bO88575 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.59■■□□□ 1.69
Slc6a20bO88575 Rps24-207ENSMUST00000224568 714 ntBASIC25.59■■□□□ 1.69
Slc6a20bO88575 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.59■■□□□ 1.69
Slc6a20bO88575 Gm13238-201ENSMUST00000117655 780 ntBASIC25.58■■□□□ 1.69
Slc6a20bO88575 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Slc6a20bO88575 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Slc6a20bO88575 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Slc6a20bO88575 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Slc6a20bO88575 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC25.58■■□□□ 1.69
Slc6a20bO88575 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Slc6a20bO88575 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.57■■□□□ 1.68
Slc6a20bO88575 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Slc6a20bO88575 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Slc6a20bO88575 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Slc6a20bO88575 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Slc6a20bO88575 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.56■■□□□ 1.68
Slc6a20bO88575 Gm15820-201ENSMUST00000201566 728 ntBASIC25.56■■□□□ 1.68
Slc6a20bO88575 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Slc6a20bO88575 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Slc6a20bO88575 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.56■■□□□ 1.68
Slc6a20bO88575 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Slc6a20bO88575 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Slc6a20bO88575 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC25.55■■□□□ 1.68
Slc6a20bO88575 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC25.54■■□□□ 1.68
Slc6a20bO88575 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Slc6a20bO88575 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Slc6a20bO88575 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC25.54■■□□□ 1.68
Slc6a20bO88575 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Slc6a20bO88575 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Slc6a20bO88575 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Slc6a20bO88575 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Slc6a20bO88575 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
Slc6a20bO88575 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC25.52■■□□□ 1.68
Slc6a20bO88575 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Slc6a20bO88575 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Slc6a20bO88575 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
Slc6a20bO88575 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Slc6a20bO88575 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Slc6a20bO88575 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Slc6a20bO88575 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC25.5■■□□□ 1.67
Slc6a20bO88575 Gm45102-201ENSMUST00000207427 857 ntBASIC25.5■■□□□ 1.67
Slc6a20bO88575 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
Slc6a20bO88575 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Slc6a20bO88575 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Slc6a20bO88575 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Slc6a20bO88575 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Slc6a20bO88575 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
Slc6a20bO88575 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms