Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pfdn2O70591 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pfdn2O70591 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pfdn2O70591 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pfdn2O70591 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pfdn2O70591 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pfdn2O70591 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pfdn2O70591 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pfdn2O70591 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pfdn2O70591 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pfdn2O70591 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pfdn2O70591 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Pfdn2O70591 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pfdn2O70591 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pfdn2O70591 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pfdn2O70591 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pfdn2O70591 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.88■□□□□ 0.61
Pfdn2O70591 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pfdn2O70591 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.88■□□□□ 0.61
Pfdn2O70591 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pfdn2O70591 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Pfdn2O70591 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pfdn2O70591 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pfdn2O70591 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pfdn2O70591 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pfdn2O70591 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pfdn2O70591 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pfdn2O70591 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pfdn2O70591 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pfdn2O70591 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.86■□□□□ 0.61
Pfdn2O70591 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pfdn2O70591 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pfdn2O70591 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pfdn2O70591 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pfdn2O70591 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pfdn2O70591 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn2O70591 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn2O70591 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn2O70591 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pfdn2O70591 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pfdn2O70591 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pfdn2O70591 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pfdn2O70591 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pfdn2O70591 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Pfdn2O70591 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Pfdn2O70591 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn2O70591 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn2O70591 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn2O70591 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn2O70591 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn2O70591 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn2O70591 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pfdn2O70591 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn2O70591 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Pfdn2O70591 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn2O70591 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn2O70591 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn2O70591 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.79■□□□□ 0.6
Pfdn2O70591 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn2O70591 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.79■□□□□ 0.6
Pfdn2O70591 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.78■□□□□ 0.6
Pfdn2O70591 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pfdn2O70591 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Pfdn2O70591 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pfdn2O70591 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pfdn2O70591 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn2O70591 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn2O70591 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn2O70591 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pfdn2O70591 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn2O70591 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn2O70591 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pfdn2O70591 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pfdn2O70591 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pfdn2O70591 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pfdn2O70591 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pfdn2O70591 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pfdn2O70591 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.74■□□□□ 0.59
Pfdn2O70591 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pfdn2O70591 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pfdn2O70591 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pfdn2O70591 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pfdn2O70591 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pfdn2O70591 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pfdn2O70591 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pfdn2O70591 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pfdn2O70591 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pfdn2O70591 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.72■□□□□ 0.59
Pfdn2O70591 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pfdn2O70591 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pfdn2O70591 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pfdn2O70591 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pfdn2O70591 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pfdn2O70591 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pfdn2O70591 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Pfdn2O70591 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pfdn2O70591 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.71■□□□□ 0.59
Pfdn2O70591 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pfdn2O70591 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pfdn2O70591 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms