Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Kcnu1O54982 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.6■■□□□ 1.53
Kcnu1O54982 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Kcnu1O54982 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Kcnu1O54982 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Kcnu1O54982 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Kcnu1O54982 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Kcnu1O54982 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Kcnu1O54982 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.57■■□□□ 1.52
Kcnu1O54982 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Kcnu1O54982 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Kcnu1O54982 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.55■■□□□ 1.52
Kcnu1O54982 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Kcnu1O54982 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Kcnu1O54982 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.54■■□□□ 1.52
Kcnu1O54982 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Kcnu1O54982 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.54■■□□□ 1.52
Kcnu1O54982 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Kcnu1O54982 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Kcnu1O54982 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Kcnu1O54982 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Kcnu1O54982 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Kcnu1O54982 Gm8503-201ENSMUST00000118131 455 ntBASIC24.52■■□□□ 1.52
Kcnu1O54982 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Kcnu1O54982 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC24.51■■□□□ 1.51
Kcnu1O54982 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Kcnu1O54982 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Kcnu1O54982 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Kcnu1O54982 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Kcnu1O54982 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Kcnu1O54982 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Kcnu1O54982 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Kcnu1O54982 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Kcnu1O54982 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Kcnu1O54982 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Kcnu1O54982 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.5■■□□□ 1.51
Kcnu1O54982 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Kcnu1O54982 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Kcnu1O54982 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Kcnu1O54982 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Kcnu1O54982 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Kcnu1O54982 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Kcnu1O54982 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Kcnu1O54982 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Kcnu1O54982 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Kcnu1O54982 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Kcnu1O54982 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Kcnu1O54982 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Kcnu1O54982 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Kcnu1O54982 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Kcnu1O54982 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Kcnu1O54982 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Kcnu1O54982 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.44■■□□□ 1.5
Kcnu1O54982 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Kcnu1O54982 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.43■■□□□ 1.5
Kcnu1O54982 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Kcnu1O54982 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Kcnu1O54982 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Kcnu1O54982 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.43■■□□□ 1.5
Kcnu1O54982 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Kcnu1O54982 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Kcnu1O54982 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.42■■□□□ 1.5
Kcnu1O54982 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Kcnu1O54982 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Kcnu1O54982 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Kcnu1O54982 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Kcnu1O54982 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Kcnu1O54982 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Kcnu1O54982 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Kcnu1O54982 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.4■■□□□ 1.5
Kcnu1O54982 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.4■■□□□ 1.5
Kcnu1O54982 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Kcnu1O54982 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Kcnu1O54982 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Kcnu1O54982 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Kcnu1O54982 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
Kcnu1O54982 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Kcnu1O54982 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
Kcnu1O54982 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Kcnu1O54982 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Kcnu1O54982 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Kcnu1O54982 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Kcnu1O54982 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.37■■□□□ 1.49
Kcnu1O54982 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Kcnu1O54982 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Kcnu1O54982 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Kcnu1O54982 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Kcnu1O54982 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Kcnu1O54982 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Kcnu1O54982 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Kcnu1O54982 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Kcnu1O54982 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
Kcnu1O54982 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Kcnu1O54982 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Kcnu1O54982 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.35■■□□□ 1.49
Kcnu1O54982 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.35■■□□□ 1.49
Kcnu1O54982 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Kcnu1O54982 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Kcnu1O54982 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Kcnu1O54982 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 158.8 ms