Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Nr1i3O35627 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Nr1i3O35627 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Nr1i3O35627 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Nr1i3O35627 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Nr1i3O35627 Gm37136-201ENSMUST00000194368 194 ntBASIC24.8■■□□□ 1.56
Nr1i3O35627 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Nr1i3O35627 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Nr1i3O35627 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Nr1i3O35627 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Nr1i3O35627 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC24.78■■□□□ 1.56
Nr1i3O35627 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Nr1i3O35627 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Nr1i3O35627 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.78■■□□□ 1.56
Nr1i3O35627 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Nr1i3O35627 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Nr1i3O35627 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Nr1i3O35627 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Nr1i3O35627 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Nr1i3O35627 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Nr1i3O35627 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Nr1i3O35627 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Nr1i3O35627 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Nr1i3O35627 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Nr1i3O35627 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Nr1i3O35627 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Nr1i3O35627 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.72■■□□□ 1.55
Nr1i3O35627 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.72■■□□□ 1.55
Nr1i3O35627 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Nr1i3O35627 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.71■■□□□ 1.55
Nr1i3O35627 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Nr1i3O35627 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Nr1i3O35627 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Nr1i3O35627 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Nr1i3O35627 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Nr1i3O35627 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.7■■□□□ 1.54
Nr1i3O35627 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.7■■□□□ 1.54
Nr1i3O35627 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
Nr1i3O35627 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Nr1i3O35627 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.69■■□□□ 1.54
Nr1i3O35627 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Nr1i3O35627 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Nr1i3O35627 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Nr1i3O35627 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Nr1i3O35627 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.67■■□□□ 1.54
Nr1i3O35627 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.67■■□□□ 1.54
Nr1i3O35627 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Nr1i3O35627 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Nr1i3O35627 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC24.66■■□□□ 1.54
Nr1i3O35627 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
Nr1i3O35627 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Nr1i3O35627 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Nr1i3O35627 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Nr1i3O35627 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Nr1i3O35627 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Nr1i3O35627 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Nr1i3O35627 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.64■■□□□ 1.54
Nr1i3O35627 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.64■■□□□ 1.54
Nr1i3O35627 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
Nr1i3O35627 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.63■■□□□ 1.53
Nr1i3O35627 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Nr1i3O35627 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Nr1i3O35627 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Nr1i3O35627 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.63■■□□□ 1.53
Nr1i3O35627 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Nr1i3O35627 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Nr1i3O35627 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Nr1i3O35627 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Nr1i3O35627 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Nr1i3O35627 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
Nr1i3O35627 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Nr1i3O35627 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Nr1i3O35627 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Nr1i3O35627 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.6■■□□□ 1.53
Nr1i3O35627 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Nr1i3O35627 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Nr1i3O35627 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Nr1i3O35627 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Nr1i3O35627 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Nr1i3O35627 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Nr1i3O35627 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Nr1i3O35627 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.58■■□□□ 1.52
Nr1i3O35627 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Nr1i3O35627 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Nr1i3O35627 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Nr1i3O35627 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Nr1i3O35627 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Nr1i3O35627 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Nr1i3O35627 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Nr1i3O35627 Gm6821-201ENSMUST00000107540 542 ntBASIC24.54■■□□□ 1.52
Nr1i3O35627 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.54■■□□□ 1.52
Nr1i3O35627 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Nr1i3O35627 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.53■■□□□ 1.52
Nr1i3O35627 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Nr1i3O35627 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Nr1i3O35627 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Nr1i3O35627 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Nr1i3O35627 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Nr1i3O35627 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
Nr1i3O35627 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms