Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.62■■□□□ 1.21
Abca4O35600 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Abca4O35600 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Abca4O35600 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.62■■□□□ 1.21
Abca4O35600 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Abca4O35600 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.61■■□□□ 1.21
Abca4O35600 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Abca4O35600 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.6■■□□□ 1.21
Abca4O35600 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Abca4O35600 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Abca4O35600 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Abca4O35600 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Abca4O35600 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Abca4O35600 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Abca4O35600 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Abca4O35600 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Abca4O35600 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Abca4O35600 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Abca4O35600 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.58■■□□□ 1.21
Abca4O35600 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Abca4O35600 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.58■■□□□ 1.2
Abca4O35600 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Abca4O35600 Gm9812-201ENSMUST00000061934 968 ntBASIC22.57■■□□□ 1.2
Abca4O35600 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Abca4O35600 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Abca4O35600 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.56■■□□□ 1.2
Abca4O35600 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Abca4O35600 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.55■■□□□ 1.2
Abca4O35600 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Abca4O35600 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Abca4O35600 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Abca4O35600 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.53■■□□□ 1.2
Abca4O35600 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Abca4O35600 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Abca4O35600 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Abca4O35600 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.53■■□□□ 1.2
Abca4O35600 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Abca4O35600 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Abca4O35600 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.52■■□□□ 1.2
Abca4O35600 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.52■■□□□ 1.2
Abca4O35600 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Abca4O35600 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Abca4O35600 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Abca4O35600 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Abca4O35600 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Abca4O35600 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Abca4O35600 Slc35b2-207ENSMUST00000226086 850 ntBASIC22.51■■□□□ 1.19
Abca4O35600 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Abca4O35600 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Abca4O35600 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Abca4O35600 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Abca4O35600 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Abca4O35600 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Abca4O35600 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Abca4O35600 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC22.49■■□□□ 1.19
Abca4O35600 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Abca4O35600 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.48■■□□□ 1.19
Abca4O35600 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.47■■□□□ 1.19
Abca4O35600 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Abca4O35600 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.47■■□□□ 1.19
Abca4O35600 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Abca4O35600 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Abca4O35600 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Abca4O35600 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.46■■□□□ 1.19
Abca4O35600 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Abca4O35600 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Abca4O35600 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.45■■□□□ 1.18
Abca4O35600 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Abca4O35600 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Abca4O35600 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Abca4O35600 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Abca4O35600 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Abca4O35600 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.42■■□□□ 1.18
Abca4O35600 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.42■■□□□ 1.18
Abca4O35600 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.41■■□□□ 1.18
Abca4O35600 Gm13241-201ENSMUST00000094493 780 ntBASIC22.41■■□□□ 1.18
Abca4O35600 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Abca4O35600 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Abca4O35600 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Abca4O35600 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Abca4O35600 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Abca4O35600 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Abca4O35600 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Abca4O35600 Gm21956-201ENSMUST00000179946 522 ntBASIC22.38■■□□□ 1.17
Abca4O35600 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Abca4O35600 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC22.36■■□□□ 1.17
Abca4O35600 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Abca4O35600 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.35■■□□□ 1.17
Abca4O35600 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Abca4O35600 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Abca4O35600 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Abca4O35600 Gm43034-201ENSMUST00000198678 1364 ntBASIC22.34■■□□□ 1.17
Abca4O35600 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Abca4O35600 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Abca4O35600 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.34■■□□□ 1.17
Abca4O35600 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Abca4O35600 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Abca4O35600 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Abca4O35600 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.32■■□□□ 1.16
Abca4O35600 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms