Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
OtpO09113 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OtpO09113 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
OtpO09113 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
OtpO09113 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
OtpO09113 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
OtpO09113 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
OtpO09113 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
OtpO09113 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
OtpO09113 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.35■□□□□ 0.85
OtpO09113 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
OtpO09113 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
OtpO09113 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
OtpO09113 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.35■□□□□ 0.85
OtpO09113 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
OtpO09113 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
OtpO09113 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
OtpO09113 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
OtpO09113 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.34■□□□□ 0.85
OtpO09113 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
OtpO09113 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
OtpO09113 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
OtpO09113 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
OtpO09113 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
OtpO09113 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
OtpO09113 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
OtpO09113 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
OtpO09113 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OtpO09113 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OtpO09113 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
OtpO09113 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
OtpO09113 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
OtpO09113 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
OtpO09113 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
OtpO09113 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
OtpO09113 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.3■□□□□ 0.84
OtpO09113 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OtpO09113 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OtpO09113 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OtpO09113 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OtpO09113 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
OtpO09113 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
OtpO09113 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
OtpO09113 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
OtpO09113 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
OtpO09113 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
OtpO09113 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
OtpO09113 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
OtpO09113 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
OtpO09113 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
OtpO09113 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
OtpO09113 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
OtpO09113 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
OtpO09113 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.26■□□□□ 0.83
OtpO09113 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
OtpO09113 Gm8503-201ENSMUST00000118131 455 ntBASIC20.26■□□□□ 0.83
OtpO09113 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.26■□□□□ 0.83
OtpO09113 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
OtpO09113 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
OtpO09113 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
OtpO09113 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
OtpO09113 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
OtpO09113 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
OtpO09113 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
OtpO09113 Gm37136-201ENSMUST00000194368 194 ntBASIC20.24■□□□□ 0.83
OtpO09113 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
OtpO09113 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OtpO09113 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.23■□□□□ 0.83
OtpO09113 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.23■□□□□ 0.83
OtpO09113 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
OtpO09113 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
OtpO09113 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
OtpO09113 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
OtpO09113 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
OtpO09113 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
OtpO09113 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OtpO09113 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OtpO09113 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
OtpO09113 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OtpO09113 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OtpO09113 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
OtpO09113 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OtpO09113 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
OtpO09113 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
OtpO09113 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
OtpO09113 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
OtpO09113 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
OtpO09113 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
OtpO09113 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
OtpO09113 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
OtpO09113 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
OtpO09113 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
OtpO09113 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
OtpO09113 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
OtpO09113 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
OtpO09113 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
OtpO09113 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
OtpO09113 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
OtpO09113 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
OtpO09113 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms