Protein–RNA interactions for Protein: O08843

Lst1, Leukocyte-specific transcript 1 protein, mousemouse

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lst1O08843 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Lst1O08843 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lst1O08843 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Lst1O08843 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lst1O08843 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lst1O08843 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lst1O08843 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lst1O08843 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Lst1O08843 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lst1O08843 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lst1O08843 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lst1O08843 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lst1O08843 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Lst1O08843 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lst1O08843 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lst1O08843 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lst1O08843 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lst1O08843 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lst1O08843 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lst1O08843 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lst1O08843 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Lst1O08843 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lst1O08843 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Lst1O08843 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lst1O08843 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lst1O08843 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lst1O08843 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lst1O08843 Peli2-204ENSMUST00000226513 1320 ntBASIC15.45■□□□□ 0.06
Lst1O08843 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lst1O08843 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lst1O08843 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Lst1O08843 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lst1O08843 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lst1O08843 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lst1O08843 H3f3aos-201ENSMUST00000097448 2905 ntBASIC15.44■□□□□ 0.06
Lst1O08843 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Lst1O08843 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lst1O08843 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lst1O08843 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lst1O08843 Gm17082-201ENSMUST00000166043 1091 ntBASIC15.44■□□□□ 0.06
Lst1O08843 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lst1O08843 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Lst1O08843 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Lst1O08843 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lst1O08843 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lst1O08843 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lst1O08843 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.43■□□□□ 0.06
Lst1O08843 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lst1O08843 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Lst1O08843 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lst1O08843 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lst1O08843 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Lst1O08843 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lst1O08843 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.41■□□□□ 0.06
Lst1O08843 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Lst1O08843 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Lst1O08843 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.41■□□□□ 0.06
Lst1O08843 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Lst1O08843 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lst1O08843 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC15.41■□□□□ 0.06
Lst1O08843 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lst1O08843 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lst1O08843 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lst1O08843 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC15.4■□□□□ 0.06
Lst1O08843 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lst1O08843 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Lst1O08843 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Lst1O08843 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lst1O08843 Gm20634-201ENSMUST00000090779 2956 ntBASIC15.39■□□□□ 0.05
Lst1O08843 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lst1O08843 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Lst1O08843 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lst1O08843 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Lst1O08843 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC15.39■□□□□ 0.05
Lst1O08843 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Lst1O08843 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Lst1O08843 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lst1O08843 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lst1O08843 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Lst1O08843 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Lst1O08843 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lst1O08843 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lst1O08843 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lst1O08843 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lst1O08843 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Lst1O08843 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Lst1O08843 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lst1O08843 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lst1O08843 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Lst1O08843 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lst1O08843 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lst1O08843 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Lst1O08843 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lst1O08843 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lst1O08843 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Lst1O08843 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lst1O08843 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Lst1O08843 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lst1O08843 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Lst1O08843 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms