Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Tnfrsf11bO08712 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Tnfrsf11bO08712 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.34■■□□□ 1.33
Tnfrsf11bO08712 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Tnfrsf11bO08712 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Tnfrsf11bO08712 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Tnfrsf11bO08712 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Tnfrsf11bO08712 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Tnfrsf11bO08712 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
Tnfrsf11bO08712 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.32■■□□□ 1.32
Tnfrsf11bO08712 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Tnfrsf11bO08712 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.31■■□□□ 1.32
Tnfrsf11bO08712 Gm37136-201ENSMUST00000194368 194 ntBASIC23.31■■□□□ 1.32
Tnfrsf11bO08712 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.31■■□□□ 1.32
Tnfrsf11bO08712 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.31■■□□□ 1.32
Tnfrsf11bO08712 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Tnfrsf11bO08712 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Tnfrsf11bO08712 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Tnfrsf11bO08712 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Tnfrsf11bO08712 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Tnfrsf11bO08712 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.3■■□□□ 1.32
Tnfrsf11bO08712 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Tnfrsf11bO08712 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Tnfrsf11bO08712 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.29■■□□□ 1.32
Tnfrsf11bO08712 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tnfrsf11bO08712 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Tnfrsf11bO08712 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Tnfrsf11bO08712 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tnfrsf11bO08712 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tnfrsf11bO08712 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Tnfrsf11bO08712 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.27■■□□□ 1.32
Tnfrsf11bO08712 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Tnfrsf11bO08712 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.27■■□□□ 1.32
Tnfrsf11bO08712 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Tnfrsf11bO08712 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Tnfrsf11bO08712 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Tnfrsf11bO08712 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Tnfrsf11bO08712 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.26■■□□□ 1.31
Tnfrsf11bO08712 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Tnfrsf11bO08712 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tnfrsf11bO08712 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Tnfrsf11bO08712 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tnfrsf11bO08712 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tnfrsf11bO08712 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tnfrsf11bO08712 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.24■■□□□ 1.31
Tnfrsf11bO08712 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Tnfrsf11bO08712 Gm6821-201ENSMUST00000107540 542 ntBASIC23.24■■□□□ 1.31
Tnfrsf11bO08712 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Tnfrsf11bO08712 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Tnfrsf11bO08712 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Tnfrsf11bO08712 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tnfrsf11bO08712 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Tnfrsf11bO08712 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.23■■□□□ 1.31
Tnfrsf11bO08712 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.23■■□□□ 1.31
Tnfrsf11bO08712 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tnfrsf11bO08712 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Tnfrsf11bO08712 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.22■■□□□ 1.31
Tnfrsf11bO08712 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tnfrsf11bO08712 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tnfrsf11bO08712 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.21■■□□□ 1.31
Tnfrsf11bO08712 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Tnfrsf11bO08712 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Tnfrsf11bO08712 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tnfrsf11bO08712 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Tnfrsf11bO08712 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tnfrsf11bO08712 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tnfrsf11bO08712 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Tnfrsf11bO08712 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Tnfrsf11bO08712 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Tnfrsf11bO08712 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tnfrsf11bO08712 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tnfrsf11bO08712 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Tnfrsf11bO08712 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tnfrsf11bO08712 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tnfrsf11bO08712 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Tnfrsf11bO08712 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Tnfrsf11bO08712 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tnfrsf11bO08712 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.16■■□□□ 1.3
Tnfrsf11bO08712 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tnfrsf11bO08712 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.14■■□□□ 1.29
Tnfrsf11bO08712 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tnfrsf11bO08712 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tnfrsf11bO08712 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tnfrsf11bO08712 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Tnfrsf11bO08712 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Tnfrsf11bO08712 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tnfrsf11bO08712 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tnfrsf11bO08712 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tnfrsf11bO08712 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Tnfrsf11bO08712 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tnfrsf11bO08712 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tnfrsf11bO08712 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Tnfrsf11bO08712 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Tnfrsf11bO08712 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.1■■□□□ 1.29
Tnfrsf11bO08712 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.1■■□□□ 1.29
Tnfrsf11bO08712 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tnfrsf11bO08712 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tnfrsf11bO08712 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tnfrsf11bO08712 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Tnfrsf11bO08712 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 183.4 ms