Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Tnfrsf11bO08712 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Tnfrsf11bO08712 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.34■■□□□ 1.33
Tnfrsf11bO08712 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Tnfrsf11bO08712 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Tnfrsf11bO08712 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Tnfrsf11bO08712 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Tnfrsf11bO08712 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Tnfrsf11bO08712 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
Tnfrsf11bO08712 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.32■■□□□ 1.32
Tnfrsf11bO08712 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Tnfrsf11bO08712 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.31■■□□□ 1.32
Tnfrsf11bO08712 Gm37136-201ENSMUST00000194368 194 ntBASIC23.31■■□□□ 1.32
Tnfrsf11bO08712 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.31■■□□□ 1.32
Tnfrsf11bO08712 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.31■■□□□ 1.32
Tnfrsf11bO08712 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Tnfrsf11bO08712 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Tnfrsf11bO08712 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Tnfrsf11bO08712 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Tnfrsf11bO08712 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Tnfrsf11bO08712 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.3■■□□□ 1.32
Tnfrsf11bO08712 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Tnfrsf11bO08712 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Tnfrsf11bO08712 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.29■■□□□ 1.32
Tnfrsf11bO08712 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tnfrsf11bO08712 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Tnfrsf11bO08712 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Tnfrsf11bO08712 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tnfrsf11bO08712 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tnfrsf11bO08712 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Tnfrsf11bO08712 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.27■■□□□ 1.32
Tnfrsf11bO08712 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Tnfrsf11bO08712 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.27■■□□□ 1.32
Tnfrsf11bO08712 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Tnfrsf11bO08712 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Tnfrsf11bO08712 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Tnfrsf11bO08712 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Tnfrsf11bO08712 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.26■■□□□ 1.31
Tnfrsf11bO08712 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Tnfrsf11bO08712 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tnfrsf11bO08712 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Tnfrsf11bO08712 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tnfrsf11bO08712 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tnfrsf11bO08712 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tnfrsf11bO08712 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.24■■□□□ 1.31
Tnfrsf11bO08712 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Tnfrsf11bO08712 Gm6821-201ENSMUST00000107540 542 ntBASIC23.24■■□□□ 1.31
Tnfrsf11bO08712 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Tnfrsf11bO08712 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Tnfrsf11bO08712 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Tnfrsf11bO08712 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tnfrsf11bO08712 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Tnfrsf11bO08712 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.23■■□□□ 1.31
Tnfrsf11bO08712 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.23■■□□□ 1.31
Tnfrsf11bO08712 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tnfrsf11bO08712 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Tnfrsf11bO08712 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.22■■□□□ 1.31
Tnfrsf11bO08712 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tnfrsf11bO08712 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tnfrsf11bO08712 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.21■■□□□ 1.31
Tnfrsf11bO08712 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Tnfrsf11bO08712 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Tnfrsf11bO08712 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tnfrsf11bO08712 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Tnfrsf11bO08712 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tnfrsf11bO08712 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tnfrsf11bO08712 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Tnfrsf11bO08712 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Tnfrsf11bO08712 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Tnfrsf11bO08712 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tnfrsf11bO08712 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tnfrsf11bO08712 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Tnfrsf11bO08712 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tnfrsf11bO08712 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tnfrsf11bO08712 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Tnfrsf11bO08712 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Tnfrsf11bO08712 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tnfrsf11bO08712 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.16■■□□□ 1.3
Tnfrsf11bO08712 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tnfrsf11bO08712 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.14■■□□□ 1.29
Tnfrsf11bO08712 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tnfrsf11bO08712 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tnfrsf11bO08712 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tnfrsf11bO08712 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Tnfrsf11bO08712 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Tnfrsf11bO08712 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tnfrsf11bO08712 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tnfrsf11bO08712 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tnfrsf11bO08712 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Tnfrsf11bO08712 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tnfrsf11bO08712 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tnfrsf11bO08712 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Tnfrsf11bO08712 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Tnfrsf11bO08712 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.1■■□□□ 1.29
Tnfrsf11bO08712 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.1■■□□□ 1.29
Tnfrsf11bO08712 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tnfrsf11bO08712 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tnfrsf11bO08712 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tnfrsf11bO08712 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Tnfrsf11bO08712 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms