Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MsmbO08540 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MsmbO08540 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
MsmbO08540 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
MsmbO08540 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
MsmbO08540 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.64■□□□□ 0.41
MsmbO08540 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
MsmbO08540 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MsmbO08540 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MsmbO08540 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
MsmbO08540 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
MsmbO08540 Gm45364-201ENSMUST00000210883 159 ntBASIC17.63■□□□□ 0.41
MsmbO08540 Gm11175-201ENSMUST00000116172 543 ntBASIC17.62■□□□□ 0.41
MsmbO08540 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.62■□□□□ 0.41
MsmbO08540 Mir3960-201ENSMUST00000198213 73 ntBASIC17.62■□□□□ 0.41
MsmbO08540 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MsmbO08540 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MsmbO08540 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MsmbO08540 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MsmbO08540 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MsmbO08540 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.59■□□□□ 0.41
MsmbO08540 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MsmbO08540 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
MsmbO08540 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
MsmbO08540 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MsmbO08540 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MsmbO08540 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.58■□□□□ 0.41
MsmbO08540 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.58■□□□□ 0.4
MsmbO08540 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.58■□□□□ 0.4
MsmbO08540 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
MsmbO08540 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MsmbO08540 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.57■□□□□ 0.4
MsmbO08540 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MsmbO08540 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
MsmbO08540 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MsmbO08540 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
MsmbO08540 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MsmbO08540 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.56■□□□□ 0.4
MsmbO08540 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MsmbO08540 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
MsmbO08540 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MsmbO08540 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MsmbO08540 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.55■□□□□ 0.4
MsmbO08540 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MsmbO08540 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MsmbO08540 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MsmbO08540 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.55■□□□□ 0.4
MsmbO08540 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
MsmbO08540 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MsmbO08540 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MsmbO08540 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.54■□□□□ 0.4
MsmbO08540 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MsmbO08540 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MsmbO08540 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MsmbO08540 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
MsmbO08540 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MsmbO08540 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MsmbO08540 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MsmbO08540 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MsmbO08540 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
MsmbO08540 Scarna2-201ENSMUST00000157560 414 ntBASIC17.53■□□□□ 0.4
MsmbO08540 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MsmbO08540 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MsmbO08540 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MsmbO08540 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MsmbO08540 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MsmbO08540 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MsmbO08540 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MsmbO08540 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MsmbO08540 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MsmbO08540 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
MsmbO08540 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MsmbO08540 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MsmbO08540 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MsmbO08540 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MsmbO08540 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MsmbO08540 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MsmbO08540 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.5■□□□□ 0.39
MsmbO08540 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.49■□□□□ 0.39
MsmbO08540 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MsmbO08540 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.49■□□□□ 0.39
MsmbO08540 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MsmbO08540 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MsmbO08540 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MsmbO08540 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MsmbO08540 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MsmbO08540 Gm16437-201ENSMUST00000025669 507 ntBASIC17.48■□□□□ 0.39
MsmbO08540 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MsmbO08540 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MsmbO08540 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MsmbO08540 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MsmbO08540 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MsmbO08540 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MsmbO08540 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MsmbO08540 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MsmbO08540 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
MsmbO08540 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
MsmbO08540 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.46■□□□□ 0.39
MsmbO08540 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MsmbO08540 Gm9806-201ENSMUST00000051080 552 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms