Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm12887B1AVM1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.59■□□□□ 0.57
Gm12887B1AVM1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm12887B1AVM1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm12887B1AVM1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm12887B1AVM1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm12887B1AVM1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm12887B1AVM1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Gm12887B1AVM1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm12887B1AVM1 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.57■□□□□ 0.56
Gm12887B1AVM1 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.57■□□□□ 0.56
Gm12887B1AVM1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm12887B1AVM1 Gm16148-201ENSMUST00000119653 893 ntBASIC18.56■□□□□ 0.56
Gm12887B1AVM1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm12887B1AVM1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm12887B1AVM1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm12887B1AVM1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Gm12887B1AVM1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Gm12887B1AVM1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Gm12887B1AVM1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm12887B1AVM1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm12887B1AVM1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm12887B1AVM1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm12887B1AVM1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm12887B1AVM1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm12887B1AVM1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm12887B1AVM1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Gm12887B1AVM1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Gm12887B1AVM1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm12887B1AVM1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm12887B1AVM1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm12887B1AVM1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Gm12887B1AVM1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.5■□□□□ 0.55
Gm12887B1AVM1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm12887B1AVM1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm12887B1AVM1 Particl-201ENSMUST00000205370 1560 ntBASIC18.5■□□□□ 0.55
Gm12887B1AVM1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm12887B1AVM1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm12887B1AVM1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Gm12887B1AVM1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm12887B1AVM1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Gm12887B1AVM1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm12887B1AVM1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm12887B1AVM1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm12887B1AVM1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm12887B1AVM1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm12887B1AVM1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm12887B1AVM1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm12887B1AVM1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm12887B1AVM1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Gm12887B1AVM1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm12887B1AVM1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm12887B1AVM1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.46■□□□□ 0.55
Gm12887B1AVM1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gm12887B1AVM1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.46■□□□□ 0.55
Gm12887B1AVM1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Gm12887B1AVM1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Gm12887B1AVM1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm12887B1AVM1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm12887B1AVM1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm12887B1AVM1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm12887B1AVM1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm12887B1AVM1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm12887B1AVM1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm12887B1AVM1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gm12887B1AVM1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm12887B1AVM1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm12887B1AVM1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.43■□□□□ 0.54
Gm12887B1AVM1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm12887B1AVM1 Gm24804-201ENSMUST00000174982 85 ntBASIC18.43■□□□□ 0.54
Gm12887B1AVM1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm12887B1AVM1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm12887B1AVM1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm12887B1AVM1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Gm12887B1AVM1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm12887B1AVM1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm12887B1AVM1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.42■□□□□ 0.54
Gm12887B1AVM1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Gm12887B1AVM1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms