Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm12887B1AVM1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.59■□□□□ 0.57
Gm12887B1AVM1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm12887B1AVM1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm12887B1AVM1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm12887B1AVM1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm12887B1AVM1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm12887B1AVM1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Gm12887B1AVM1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm12887B1AVM1 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.57■□□□□ 0.56
Gm12887B1AVM1 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.57■□□□□ 0.56
Gm12887B1AVM1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm12887B1AVM1 Gm16148-201ENSMUST00000119653 893 ntBASIC18.56■□□□□ 0.56
Gm12887B1AVM1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm12887B1AVM1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm12887B1AVM1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm12887B1AVM1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Gm12887B1AVM1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Gm12887B1AVM1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Gm12887B1AVM1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.54■□□□□ 0.56
Gm12887B1AVM1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm12887B1AVM1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm12887B1AVM1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm12887B1AVM1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm12887B1AVM1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm12887B1AVM1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm12887B1AVM1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm12887B1AVM1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Gm12887B1AVM1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Gm12887B1AVM1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm12887B1AVM1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm12887B1AVM1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm12887B1AVM1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm12887B1AVM1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Gm12887B1AVM1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.5■□□□□ 0.55
Gm12887B1AVM1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm12887B1AVM1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm12887B1AVM1 Particl-201ENSMUST00000205370 1560 ntBASIC18.5■□□□□ 0.55
Gm12887B1AVM1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm12887B1AVM1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm12887B1AVM1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Gm12887B1AVM1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm12887B1AVM1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Gm12887B1AVM1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm12887B1AVM1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm12887B1AVM1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm12887B1AVM1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm12887B1AVM1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm12887B1AVM1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm12887B1AVM1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm12887B1AVM1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm12887B1AVM1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Gm12887B1AVM1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm12887B1AVM1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm12887B1AVM1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.46■□□□□ 0.55
Gm12887B1AVM1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gm12887B1AVM1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.46■□□□□ 0.55
Gm12887B1AVM1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Gm12887B1AVM1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Gm12887B1AVM1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm12887B1AVM1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm12887B1AVM1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm12887B1AVM1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm12887B1AVM1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm12887B1AVM1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm12887B1AVM1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm12887B1AVM1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gm12887B1AVM1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm12887B1AVM1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm12887B1AVM1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.43■□□□□ 0.54
Gm12887B1AVM1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm12887B1AVM1 Gm24804-201ENSMUST00000174982 85 ntBASIC18.43■□□□□ 0.54
Gm12887B1AVM1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm12887B1AVM1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm12887B1AVM1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm12887B1AVM1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Gm12887B1AVM1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm12887B1AVM1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm12887B1AVM1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.42■□□□□ 0.54
Gm12887B1AVM1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Gm12887B1AVM1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms