Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav12d-1A0N8R0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav12d-1A0N8R0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav12d-1A0N8R0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.48■□□□□ 0.55
Trav12d-1A0N8R0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav12d-1A0N8R0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav12d-1A0N8R0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav12d-1A0N8R0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav12d-1A0N8R0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Trav12d-1A0N8R0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav12d-1A0N8R0 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.46■□□□□ 0.55
Trav12d-1A0N8R0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav12d-1A0N8R0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav12d-1A0N8R0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav12d-1A0N8R0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav12d-1A0N8R0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.46■□□□□ 0.55
Trav12d-1A0N8R0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav12d-1A0N8R0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav12d-1A0N8R0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.45■□□□□ 0.54
Trav12d-1A0N8R0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav12d-1A0N8R0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav12d-1A0N8R0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trav12d-1A0N8R0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav12d-1A0N8R0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav12d-1A0N8R0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav12d-1A0N8R0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trav12d-1A0N8R0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav12d-1A0N8R0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.42■□□□□ 0.54
Trav12d-1A0N8R0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav12d-1A0N8R0 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.41■□□□□ 0.54
Trav12d-1A0N8R0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav12d-1A0N8R0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Trav12d-1A0N8R0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav12d-1A0N8R0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav12d-1A0N8R0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav12d-1A0N8R0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav12d-1A0N8R0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav12d-1A0N8R0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav12d-1A0N8R0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav12d-1A0N8R0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav12d-1A0N8R0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav12d-1A0N8R0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav12d-1A0N8R0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav12d-1A0N8R0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav12d-1A0N8R0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav12d-1A0N8R0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Trav12d-1A0N8R0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav12d-1A0N8R0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trav12d-1A0N8R0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trav12d-1A0N8R0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Trav12d-1A0N8R0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav12d-1A0N8R0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav12d-1A0N8R0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trav12d-1A0N8R0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav12d-1A0N8R0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trav12d-1A0N8R0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav12d-1A0N8R0 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.36■□□□□ 0.53
Trav12d-1A0N8R0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav12d-1A0N8R0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav12d-1A0N8R0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trav12d-1A0N8R0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trav12d-1A0N8R0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav12d-1A0N8R0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav12d-1A0N8R0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav12d-1A0N8R0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav12d-1A0N8R0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.35■□□□□ 0.53
Trav12d-1A0N8R0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav12d-1A0N8R0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav12d-1A0N8R0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav12d-1A0N8R0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav12d-1A0N8R0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav12d-1A0N8R0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trav12d-1A0N8R0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav12d-1A0N8R0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav12d-1A0N8R0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.34■□□□□ 0.53
Trav12d-1A0N8R0 Gm45855-201ENSMUST00000212546 880 ntBASIC18.34■□□□□ 0.53
Trav12d-1A0N8R0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav12d-1A0N8R0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav12d-1A0N8R0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav12d-1A0N8R0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
Trav12d-1A0N8R0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Trav12d-1A0N8R0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav12d-1A0N8R0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trav12d-1A0N8R0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav12d-1A0N8R0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav12d-1A0N8R0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trav12d-1A0N8R0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav12d-1A0N8R0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav12d-1A0N8R0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav12d-1A0N8R0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav12d-1A0N8R0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav12d-1A0N8R0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav12d-1A0N8R0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav12d-1A0N8R0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.31■□□□□ 0.52
Trav12d-1A0N8R0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.31■□□□□ 0.52
Trav12d-1A0N8R0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trav12d-1A0N8R0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav12d-1A0N8R0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trav12d-1A0N8R0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav12d-1A0N8R0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms