Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Gm31748-201ENSMUST00000194938 1497 ntBASIC15.73■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Tdp2-203ENSMUST00000223804 1136 ntBASIC15.73■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Il17rd-202ENSMUST00000223942 2186 ntBASIC15.73■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13d-4A0A0G2JFX3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-4A0A0G2JFX3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-4A0A0G2JFX3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Gm45855-201ENSMUST00000212546 880 ntBASIC15.7■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav13d-4A0A0G2JFX3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav13d-4A0A0G2JFX3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13d-4A0A0G2JFX3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13d-4A0A0G2JFX3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav13d-4A0A0G2JFX3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC15.67■□□□□ 0.1
Trav13d-4A0A0G2JFX3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.67■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC15.66■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13d-4A0A0G2JFX3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Particl-201ENSMUST00000205370 1560 ntBASIC15.63■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.63■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-4A0A0G2JFX3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13d-4A0A0G2JFX3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Trav13d-4A0A0G2JFX3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC15.59■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13d-4A0A0G2JFX3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13d-4A0A0G2JFX3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-4A0A0G2JFX3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav13d-4A0A0G2JFX3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC15.57■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-4A0A0G2JFX3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-4A0A0G2JFX3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms