Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9n-2A0A0G2JDP3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Trav9n-2A0A0G2JDP3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav9n-2A0A0G2JDP3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.57■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9n-2A0A0G2JDP3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9n-2A0A0G2JDP3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Gm37136-201ENSMUST00000194368 194 ntBASIC16.55■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.54■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9n-2A0A0G2JDP3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC16.53■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9n-2A0A0G2JDP3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.52■□□□□ 0.24
Trav9n-2A0A0G2JDP3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9n-2A0A0G2JDP3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.5■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9n-2A0A0G2JDP3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.5■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9n-2A0A0G2JDP3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav9n-2A0A0G2JDP3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9n-2A0A0G2JDP3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9n-2A0A0G2JDP3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9n-2A0A0G2JDP3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms