Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv19A0A0B4J1H4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.4■□□□□ 0.54
Trbv19A0A0B4J1H4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv19A0A0B4J1H4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.4■□□□□ 0.54
Trbv19A0A0B4J1H4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv19A0A0B4J1H4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv19A0A0B4J1H4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv19A0A0B4J1H4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv19A0A0B4J1H4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv19A0A0B4J1H4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trbv19A0A0B4J1H4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv19A0A0B4J1H4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv19A0A0B4J1H4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Trbv19A0A0B4J1H4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.36■□□□□ 0.53
Trbv19A0A0B4J1H4 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.36■□□□□ 0.53
Trbv19A0A0B4J1H4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv19A0A0B4J1H4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Trbv19A0A0B4J1H4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv19A0A0B4J1H4 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.35■□□□□ 0.53
Trbv19A0A0B4J1H4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv19A0A0B4J1H4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trbv19A0A0B4J1H4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv19A0A0B4J1H4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.34■□□□□ 0.53
Trbv19A0A0B4J1H4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv19A0A0B4J1H4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.34■□□□□ 0.53
Trbv19A0A0B4J1H4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv19A0A0B4J1H4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trbv19A0A0B4J1H4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv19A0A0B4J1H4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trbv19A0A0B4J1H4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trbv19A0A0B4J1H4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv19A0A0B4J1H4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv19A0A0B4J1H4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv19A0A0B4J1H4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.32■□□□□ 0.52
Trbv19A0A0B4J1H4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.32■□□□□ 0.52
Trbv19A0A0B4J1H4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv19A0A0B4J1H4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv19A0A0B4J1H4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trbv19A0A0B4J1H4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv19A0A0B4J1H4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv19A0A0B4J1H4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv19A0A0B4J1H4 Gm37136-201ENSMUST00000194368 194 ntBASIC18.31■□□□□ 0.52
Trbv19A0A0B4J1H4 Gm6821-201ENSMUST00000107540 542 ntBASIC18.3■□□□□ 0.52
Trbv19A0A0B4J1H4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.3■□□□□ 0.52
Trbv19A0A0B4J1H4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv19A0A0B4J1H4 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.3■□□□□ 0.52
Trbv19A0A0B4J1H4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv19A0A0B4J1H4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv19A0A0B4J1H4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.29■□□□□ 0.52
Trbv19A0A0B4J1H4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv19A0A0B4J1H4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv19A0A0B4J1H4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv19A0A0B4J1H4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv19A0A0B4J1H4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv19A0A0B4J1H4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.28■□□□□ 0.52
Trbv19A0A0B4J1H4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv19A0A0B4J1H4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Trbv19A0A0B4J1H4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.28■□□□□ 0.52
Trbv19A0A0B4J1H4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv19A0A0B4J1H4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv19A0A0B4J1H4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Trbv19A0A0B4J1H4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv19A0A0B4J1H4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv19A0A0B4J1H4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.26■□□□□ 0.51
Trbv19A0A0B4J1H4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trbv19A0A0B4J1H4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv19A0A0B4J1H4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv19A0A0B4J1H4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv19A0A0B4J1H4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv19A0A0B4J1H4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv19A0A0B4J1H4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv19A0A0B4J1H4 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.25■□□□□ 0.51
Trbv19A0A0B4J1H4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv19A0A0B4J1H4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv19A0A0B4J1H4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv19A0A0B4J1H4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv19A0A0B4J1H4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv19A0A0B4J1H4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv19A0A0B4J1H4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv19A0A0B4J1H4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.24■□□□□ 0.51
Trbv19A0A0B4J1H4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv19A0A0B4J1H4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv19A0A0B4J1H4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv19A0A0B4J1H4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv19A0A0B4J1H4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv19A0A0B4J1H4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trbv19A0A0B4J1H4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv19A0A0B4J1H4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv19A0A0B4J1H4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv19A0A0B4J1H4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv19A0A0B4J1H4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trbv19A0A0B4J1H4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv19A0A0B4J1H4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Trbv19A0A0B4J1H4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv19A0A0B4J1H4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv19A0A0B4J1H4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv19A0A0B4J1H4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv19A0A0B4J1H4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.2■□□□□ 0.5
Trbv19A0A0B4J1H4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv19A0A0B4J1H4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms