Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.79■■□□□ 1.4
Pcdh7A0A0A6YY83 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdh7A0A0A6YY83 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdh7A0A0A6YY83 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdh7A0A0A6YY83 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.77■■□□□ 1.4
Pcdh7A0A0A6YY83 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdh7A0A0A6YY83 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdh7A0A0A6YY83 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdh7A0A0A6YY83 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh7A0A0A6YY83 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh7A0A0A6YY83 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.76■■□□□ 1.39
Pcdh7A0A0A6YY83 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.76■■□□□ 1.39
Pcdh7A0A0A6YY83 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdh7A0A0A6YY83 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdh7A0A0A6YY83 Gm4799-201ENSMUST00000095396 657 ntBASIC23.75■■□□□ 1.39
Pcdh7A0A0A6YY83 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.74■■□□□ 1.39
Pcdh7A0A0A6YY83 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.74■■□□□ 1.39
Pcdh7A0A0A6YY83 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Pcdh7A0A0A6YY83 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdh7A0A0A6YY83 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Pcdh7A0A0A6YY83 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.73■■□□□ 1.39
Pcdh7A0A0A6YY83 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdh7A0A0A6YY83 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdh7A0A0A6YY83 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdh7A0A0A6YY83 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdh7A0A0A6YY83 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdh7A0A0A6YY83 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Pcdh7A0A0A6YY83 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Pcdh7A0A0A6YY83 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdh7A0A0A6YY83 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdh7A0A0A6YY83 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdh7A0A0A6YY83 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdh7A0A0A6YY83 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdh7A0A0A6YY83 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdh7A0A0A6YY83 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdh7A0A0A6YY83 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdh7A0A0A6YY83 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdh7A0A0A6YY83 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Pcdh7A0A0A6YY83 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
Pcdh7A0A0A6YY83 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdh7A0A0A6YY83 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdh7A0A0A6YY83 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdh7A0A0A6YY83 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdh7A0A0A6YY83 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdh7A0A0A6YY83 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdh7A0A0A6YY83 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.68■■□□□ 1.38
Pcdh7A0A0A6YY83 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.68■■□□□ 1.38
Pcdh7A0A0A6YY83 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdh7A0A0A6YY83 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdh7A0A0A6YY83 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdh7A0A0A6YY83 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdh7A0A0A6YY83 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdh7A0A0A6YY83 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdh7A0A0A6YY83 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Pcdh7A0A0A6YY83 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdh7A0A0A6YY83 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.67■■□□□ 1.38
Pcdh7A0A0A6YY83 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdh7A0A0A6YY83 Mir3960-201ENSMUST00000198213 73 ntBASIC23.66■■□□□ 1.38
Pcdh7A0A0A6YY83 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdh7A0A0A6YY83 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Pcdh7A0A0A6YY83 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.65■■□□□ 1.38
Pcdh7A0A0A6YY83 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdh7A0A0A6YY83 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdh7A0A0A6YY83 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Pcdh7A0A0A6YY83 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Pcdh7A0A0A6YY83 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdh7A0A0A6YY83 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdh7A0A0A6YY83 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdh7A0A0A6YY83 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdh7A0A0A6YY83 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdh7A0A0A6YY83 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.63■■□□□ 1.37
Pcdh7A0A0A6YY83 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdh7A0A0A6YY83 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdh7A0A0A6YY83 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdh7A0A0A6YY83 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.62■■□□□ 1.37
Pcdh7A0A0A6YY83 Gm9812-201ENSMUST00000061934 968 ntBASIC23.62■■□□□ 1.37
Pcdh7A0A0A6YY83 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdh7A0A0A6YY83 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.61■■□□□ 1.37
Pcdh7A0A0A6YY83 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdh7A0A0A6YY83 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdh7A0A0A6YY83 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdh7A0A0A6YY83 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.59■■□□□ 1.37
Pcdh7A0A0A6YY83 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdh7A0A0A6YY83 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.59■■□□□ 1.37
Pcdh7A0A0A6YY83 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdh7A0A0A6YY83 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Pcdh7A0A0A6YY83 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Pcdh7A0A0A6YY83 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdh7A0A0A6YY83 Gm45364-201ENSMUST00000210883 159 ntBASIC23.57■■□□□ 1.36
Pcdh7A0A0A6YY83 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdh7A0A0A6YY83 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdh7A0A0A6YY83 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.56■■□□□ 1.36
Pcdh7A0A0A6YY83 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.56■■□□□ 1.36
Pcdh7A0A0A6YY83 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.56■■□□□ 1.36
Pcdh7A0A0A6YY83 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdh7A0A0A6YY83 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdh7A0A0A6YY83 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.54■■□□□ 1.36
Pcdh7A0A0A6YY83 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdh7A0A0A6YY83 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Pcdh7A0A0A6YY83 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms