Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6-5A0A075B6B5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6-5A0A075B6B5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6-5A0A075B6B5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6-5A0A075B6B5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6-5A0A075B6B5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trav6-5A0A075B6B5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6-5A0A075B6B5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6-5A0A075B6B5 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trav6-5A0A075B6B5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav6-5A0A075B6B5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav6-5A0A075B6B5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav6-5A0A075B6B5 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trav6-5A0A075B6B5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-5A0A075B6B5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav6-5A0A075B6B5 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-5A0A075B6B5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-5A0A075B6B5 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-5A0A075B6B5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-5A0A075B6B5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trav6-5A0A075B6B5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-5A0A075B6B5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.81■□□□□ 0.44
Trav6-5A0A075B6B5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-5A0A075B6B5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-5A0A075B6B5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trav6-5A0A075B6B5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.81■□□□□ 0.44
Trav6-5A0A075B6B5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.81■□□□□ 0.44
Trav6-5A0A075B6B5 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-5A0A075B6B5 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-5A0A075B6B5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-5A0A075B6B5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-5A0A075B6B5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-5A0A075B6B5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-5A0A075B6B5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-5A0A075B6B5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trav6-5A0A075B6B5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-5A0A075B6B5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-5A0A075B6B5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-5A0A075B6B5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trav6-5A0A075B6B5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-5A0A075B6B5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-5A0A075B6B5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-5A0A075B6B5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-5A0A075B6B5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trav6-5A0A075B6B5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6-5A0A075B6B5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6-5A0A075B6B5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.77■□□□□ 0.44
Trav6-5A0A075B6B5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6-5A0A075B6B5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6-5A0A075B6B5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trav6-5A0A075B6B5 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-5A0A075B6B5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-5A0A075B6B5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-5A0A075B6B5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-5A0A075B6B5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-5A0A075B6B5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trav6-5A0A075B6B5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-5A0A075B6B5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-5A0A075B6B5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-5A0A075B6B5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trav6-5A0A075B6B5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trav6-5A0A075B6B5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-5A0A075B6B5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-5A0A075B6B5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trav6-5A0A075B6B5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-5A0A075B6B5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-5A0A075B6B5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Trav6-5A0A075B6B5 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.74■□□□□ 0.43
Trav6-5A0A075B6B5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-5A0A075B6B5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-5A0A075B6B5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-5A0A075B6B5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-5A0A075B6B5 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-5A0A075B6B5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-5A0A075B6B5 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-5A0A075B6B5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-5A0A075B6B5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-5A0A075B6B5 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-5A0A075B6B5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-5A0A075B6B5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.72■□□□□ 0.43
Trav6-5A0A075B6B5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-5A0A075B6B5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trav6-5A0A075B6B5 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6-5A0A075B6B5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trav6-5A0A075B6B5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6-5A0A075B6B5 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6-5A0A075B6B5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6-5A0A075B6B5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav6-5A0A075B6B5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6-5A0A075B6B5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trav6-5A0A075B6B5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-5A0A075B6B5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-5A0A075B6B5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-5A0A075B6B5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav6-5A0A075B6B5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.69■□□□□ 0.42
Trav6-5A0A075B6B5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-5A0A075B6B5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav6-5A0A075B6B5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-5A0A075B6B5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Trav6-5A0A075B6B5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms