Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav6n-7A0A075B6A6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav6n-7A0A075B6A6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav6n-7A0A075B6A6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Trav6n-7A0A075B6A6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.47■□□□□ 0.71
Trav6n-7A0A075B6A6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav6n-7A0A075B6A6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav6n-7A0A075B6A6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav6n-7A0A075B6A6 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.46■□□□□ 0.71
Trav6n-7A0A075B6A6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.46■□□□□ 0.71
Trav6n-7A0A075B6A6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6n-7A0A075B6A6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6n-7A0A075B6A6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6n-7A0A075B6A6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6n-7A0A075B6A6 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.45■□□□□ 0.7
Trav6n-7A0A075B6A6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6n-7A0A075B6A6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6n-7A0A075B6A6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6n-7A0A075B6A6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6n-7A0A075B6A6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6n-7A0A075B6A6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trav6n-7A0A075B6A6 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.44■□□□□ 0.7
Trav6n-7A0A075B6A6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav6n-7A0A075B6A6 Mir3960-201ENSMUST00000198213 73 ntBASIC19.44■□□□□ 0.7
Trav6n-7A0A075B6A6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav6n-7A0A075B6A6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav6n-7A0A075B6A6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6n-7A0A075B6A6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6n-7A0A075B6A6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6n-7A0A075B6A6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6n-7A0A075B6A6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6n-7A0A075B6A6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.42■□□□□ 0.7
Trav6n-7A0A075B6A6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav6n-7A0A075B6A6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav6n-7A0A075B6A6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.4■□□□□ 0.7
Trav6n-7A0A075B6A6 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.4■□□□□ 0.7
Trav6n-7A0A075B6A6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav6n-7A0A075B6A6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Trav6n-7A0A075B6A6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trav6n-7A0A075B6A6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6n-7A0A075B6A6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6n-7A0A075B6A6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.39■□□□□ 0.69
Trav6n-7A0A075B6A6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.39■□□□□ 0.69
Trav6n-7A0A075B6A6 Gm6311-201ENSMUST00000073790 878 ntBASIC19.39■□□□□ 0.69
Trav6n-7A0A075B6A6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6n-7A0A075B6A6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6n-7A0A075B6A6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.38■□□□□ 0.69
Trav6n-7A0A075B6A6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav6n-7A0A075B6A6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav6n-7A0A075B6A6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav6n-7A0A075B6A6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav6n-7A0A075B6A6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trav6n-7A0A075B6A6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.37■□□□□ 0.69
Trav6n-7A0A075B6A6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trav6n-7A0A075B6A6 Gm45364-201ENSMUST00000210883 159 ntBASIC19.37■□□□□ 0.69
Trav6n-7A0A075B6A6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav6n-7A0A075B6A6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav6n-7A0A075B6A6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav6n-7A0A075B6A6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav6n-7A0A075B6A6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav6n-7A0A075B6A6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav6n-7A0A075B6A6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav6n-7A0A075B6A6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav6n-7A0A075B6A6 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.35■□□□□ 0.69
Trav6n-7A0A075B6A6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Trav6n-7A0A075B6A6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.35■□□□□ 0.69
Trav6n-7A0A075B6A6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav6n-7A0A075B6A6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav6n-7A0A075B6A6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav6n-7A0A075B6A6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav6n-7A0A075B6A6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6n-7A0A075B6A6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6n-7A0A075B6A6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.34■□□□□ 0.69
Trav6n-7A0A075B6A6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6n-7A0A075B6A6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6n-7A0A075B6A6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trav6n-7A0A075B6A6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav6n-7A0A075B6A6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav6n-7A0A075B6A6 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.33■□□□□ 0.68
Trav6n-7A0A075B6A6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trav6n-7A0A075B6A6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Trav6n-7A0A075B6A6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav6n-7A0A075B6A6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav6n-7A0A075B6A6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Trav6n-7A0A075B6A6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav6n-7A0A075B6A6 Gm9812-201ENSMUST00000061934 968 ntBASIC19.32■□□□□ 0.68
Trav6n-7A0A075B6A6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav6n-7A0A075B6A6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav6n-7A0A075B6A6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav6n-7A0A075B6A6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trav6n-7A0A075B6A6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav6n-7A0A075B6A6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav6n-7A0A075B6A6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6n-7A0A075B6A6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trav6n-7A0A075B6A6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6n-7A0A075B6A6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6n-7A0A075B6A6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.29■□□□□ 0.68
Trav6n-7A0A075B6A6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6n-7A0A075B6A6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6n-7A0A075B6A6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms