Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-2A0A075B649 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav13-2A0A075B649 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-2A0A075B649 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav13-2A0A075B649 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13-2A0A075B649 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav13-2A0A075B649 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav13-2A0A075B649 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Trav13-2A0A075B649 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13-2A0A075B649 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13-2A0A075B649 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13-2A0A075B649 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC15.33■□□□□ 0.04
Trav13-2A0A075B649 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.33■□□□□ 0.04
Trav13-2A0A075B649 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trav13-2A0A075B649 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13-2A0A075B649 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13-2A0A075B649 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13-2A0A075B649 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav13-2A0A075B649 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13-2A0A075B649 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13-2A0A075B649 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13-2A0A075B649 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13-2A0A075B649 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13-2A0A075B649 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13-2A0A075B649 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13-2A0A075B649 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13-2A0A075B649 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13-2A0A075B649 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav13-2A0A075B649 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13-2A0A075B649 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13-2A0A075B649 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13-2A0A075B649 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav13-2A0A075B649 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Trav13-2A0A075B649 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13-2A0A075B649 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13-2A0A075B649 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-2A0A075B649 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-2A0A075B649 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-2A0A075B649 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-2A0A075B649 H3f3aos-201ENSMUST00000097448 2905 ntBASIC15.29■□□□□ 0.04
Trav13-2A0A075B649 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-2A0A075B649 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13-2A0A075B649 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13-2A0A075B649 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13-2A0A075B649 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13-2A0A075B649 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13-2A0A075B649 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13-2A0A075B649 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13-2A0A075B649 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trav13-2A0A075B649 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13-2A0A075B649 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13-2A0A075B649 AC157572.2-201ENSMUST00000226970 908 ntBASIC15.27■□□□□ 0.04
Trav13-2A0A075B649 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13-2A0A075B649 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13-2A0A075B649 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trav13-2A0A075B649 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13-2A0A075B649 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC15.26■□□□□ 0.03
Trav13-2A0A075B649 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13-2A0A075B649 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13-2A0A075B649 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13-2A0A075B649 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13-2A0A075B649 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav13-2A0A075B649 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13-2A0A075B649 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-2A0A075B649 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav13-2A0A075B649 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-2A0A075B649 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Trav13-2A0A075B649 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav13-2A0A075B649 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13-2A0A075B649 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13-2A0A075B649 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13-2A0A075B649 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav13-2A0A075B649 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13-2A0A075B649 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13-2A0A075B649 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav13-2A0A075B649 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trav13-2A0A075B649 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13-2A0A075B649 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13-2A0A075B649 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13-2A0A075B649 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav13-2A0A075B649 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav13-2A0A075B649 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC15.22■□□□□ 0.03
Trav13-2A0A075B649 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13-2A0A075B649 Gm37847-201ENSMUST00000192163 1497 ntBASIC15.21■□□□□ 0.03
Trav13-2A0A075B649 Gm31748-201ENSMUST00000194938 1497 ntBASIC15.21■□□□□ 0.03
Trav13-2A0A075B649 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13-2A0A075B649 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav13-2A0A075B649 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13-2A0A075B649 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav13-2A0A075B649 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13-2A0A075B649 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13-2A0A075B649 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav13-2A0A075B649 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13-2A0A075B649 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13-2A0A075B649 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC15.2■□□□□ 0.02
Trav13-2A0A075B649 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav13-2A0A075B649 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13-2A0A075B649 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13-2A0A075B649 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13-2A0A075B649 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms