Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16,69■□□□□ 0,26
Trav13d-1A0A075B606 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16,69■□□□□ 0,26
Trav13d-1A0A075B606 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16,68■□□□□ 0,26
Trav13d-1A0A075B606 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16,68■□□□□ 0,26
Trav13d-1A0A075B606 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16,68■□□□□ 0,26
Trav13d-1A0A075B606 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16,68■□□□□ 0,26
Trav13d-1A0A075B606 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16,68■□□□□ 0,26
Trav13d-1A0A075B606 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16,68■□□□□ 0,26
Trav13d-1A0A075B606 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16,68■□□□□ 0,26
Trav13d-1A0A075B606 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16,68■□□□□ 0,26
Trav13d-1A0A075B606 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16,68■□□□□ 0,26
Trav13d-1A0A075B606 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16,68■□□□□ 0,26
Trav13d-1A0A075B606 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16,68■□□□□ 0,26
Trav13d-1A0A075B606 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16,67■□□□□ 0,26
Trav13d-1A0A075B606 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16,67■□□□□ 0,26
Trav13d-1A0A075B606 Mir3960-201ENSMUST00000198213 73 ntBASIC16,67■□□□□ 0,26
Trav13d-1A0A075B606 AC154454.1-201ENSMUST00000225253 216 ntBASIC16,67■□□□□ 0,26
Trav13d-1A0A075B606 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC16,67■□□□□ 0,26
Trav13d-1A0A075B606 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16,67■□□□□ 0,26
Trav13d-1A0A075B606 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16,67■□□□□ 0,26
Trav13d-1A0A075B606 Pkd1-207ENSMUST00000228550 1050 ntBASIC16,66■□□□□ 0,26
Trav13d-1A0A075B606 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16,66■□□□□ 0,26
Trav13d-1A0A075B606 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16,66■□□□□ 0,26
Trav13d-1A0A075B606 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16,65■□□□□ 0,26
Trav13d-1A0A075B606 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16,65■□□□□ 0,26
Trav13d-1A0A075B606 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16,64■□□□□ 0,25
Trav13d-1A0A075B606 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16,64■□□□□ 0,25
Trav13d-1A0A075B606 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16,64■□□□□ 0,25
Trav13d-1A0A075B606 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16,63■□□□□ 0,25
Trav13d-1A0A075B606 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16,63■□□□□ 0,25
Trav13d-1A0A075B606 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16,63■□□□□ 0,25
Trav13d-1A0A075B606 Scarna2-201ENSMUST00000157560 414 ntBASIC16,63■□□□□ 0,25
Trav13d-1A0A075B606 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16,63■□□□□ 0,25
Trav13d-1A0A075B606 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16,63■□□□□ 0,25
Trav13d-1A0A075B606 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16,63■□□□□ 0,25
Trav13d-1A0A075B606 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16,63■□□□□ 0,25
Trav13d-1A0A075B606 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16,62■□□□□ 0,25
Trav13d-1A0A075B606 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16,62■□□□□ 0,25
Trav13d-1A0A075B606 Gm11687-201ENSMUST00000118911 886 ntBASIC16,62■□□□□ 0,25
Trav13d-1A0A075B606 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16,62■□□□□ 0,25
Trav13d-1A0A075B606 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16,62■□□□□ 0,25
Trav13d-1A0A075B606 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16,62■□□□□ 0,25
Trav13d-1A0A075B606 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16,62■□□□□ 0,25
Trav13d-1A0A075B606 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16,62■□□□□ 0,25
Trav13d-1A0A075B606 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16,61■□□□□ 0,25
Trav13d-1A0A075B606 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16,61■□□□□ 0,25
Trav13d-1A0A075B606 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16,61■□□□□ 0,25
Trav13d-1A0A075B606 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16,61■□□□□ 0,25
Trav13d-1A0A075B606 Gm9806-201ENSMUST00000051080 552 ntBASIC16,61■□□□□ 0,25
Trav13d-1A0A075B606 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16,61■□□□□ 0,25
Trav13d-1A0A075B606 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16,61■□□□□ 0,25
Trav13d-1A0A075B606 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16,61■□□□□ 0,25
Trav13d-1A0A075B606 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16,61■□□□□ 0,25
Trav13d-1A0A075B606 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16,6■□□□□ 0,25
Trav13d-1A0A075B606 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16,6■□□□□ 0,25
Trav13d-1A0A075B606 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16,6■□□□□ 0,25
Trav13d-1A0A075B606 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16,6■□□□□ 0,25
Trav13d-1A0A075B606 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16,6■□□□□ 0,25
Trav13d-1A0A075B606 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16,6■□□□□ 0,25
Trav13d-1A0A075B606 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16,6■□□□□ 0,25
Trav13d-1A0A075B606 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16,59■□□□□ 0,25
Trav13d-1A0A075B606 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16,59■□□□□ 0,25
Trav13d-1A0A075B606 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16,59■□□□□ 0,25
Trav13d-1A0A075B606 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16,59■□□□□ 0,25
Trav13d-1A0A075B606 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16,58■□□□□ 0,24
Trav13d-1A0A075B606 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16,58■□□□□ 0,24
Trav13d-1A0A075B606 Gm45364-201ENSMUST00000210883 159 ntBASIC16,58■□□□□ 0,24
Trav13d-1A0A075B606 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16,58■□□□□ 0,24
Trav13d-1A0A075B606 Gm13889-201ENSMUST00000099689 1386 ntBASIC16,58■□□□□ 0,24
Trav13d-1A0A075B606 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16,58■□□□□ 0,24
Trav13d-1A0A075B606 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16,56■□□□□ 0,24
Trav13d-1A0A075B606 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16,56■□□□□ 0,24
Trav13d-1A0A075B606 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16,56■□□□□ 0,24
Trav13d-1A0A075B606 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16,56■□□□□ 0,24
Trav13d-1A0A075B606 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16,56■□□□□ 0,24
Trav13d-1A0A075B606 Gm16437-201ENSMUST00000025669 507 ntBASIC16,56■□□□□ 0,24
Trav13d-1A0A075B606 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16,56■□□□□ 0,24
Trav13d-1A0A075B606 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16,56■□□□□ 0,24
Trav13d-1A0A075B606 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16,55■□□□□ 0,24
Trav13d-1A0A075B606 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16,55■□□□□ 0,24
Trav13d-1A0A075B606 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16,55■□□□□ 0,24
Trav13d-1A0A075B606 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16,55■□□□□ 0,24
Trav13d-1A0A075B606 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16,55■□□□□ 0,24
Trav13d-1A0A075B606 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16,55■□□□□ 0,24
Trav13d-1A0A075B606 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16,55■□□□□ 0,24
Trav13d-1A0A075B606 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC16,55■□□□□ 0,24
Trav13d-1A0A075B606 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16,55■□□□□ 0,24
Trav13d-1A0A075B606 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16,55■□□□□ 0,24
Trav13d-1A0A075B606 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16,55■□□□□ 0,24
Trav13d-1A0A075B606 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16,55■□□□□ 0,24
Trav13d-1A0A075B606 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16,54■□□□□ 0,24
Trav13d-1A0A075B606 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16,54■□□□□ 0,24
Trav13d-1A0A075B606 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16,54■□□□□ 0,24
Trav13d-1A0A075B606 Gm37847-201ENSMUST00000192163 1497 ntBASIC16,54■□□□□ 0,24
Trav13d-1A0A075B606 Gm31748-201ENSMUST00000194938 1497 ntBASIC16,54■□□□□ 0,24
Trav13d-1A0A075B606 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16,53■□□□□ 0,24
Trav13d-1A0A075B606 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16,53■□□□□ 0,24
Trav13d-1A0A075B606 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16,53■□□□□ 0,24
Trav13d-1A0A075B606 Cap2-205ENSMUST00000225824 1634 ntBASIC16,53■□□□□ 0,24
Trav13d-1A0A075B606 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16,53■□□□□ 0,24
Retrieved 100 of 76,532 protein–RNA pairs in 51,5 ms