Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav7n-5A0A075B604 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav7n-5A0A075B604 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav7n-5A0A075B604 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav7n-5A0A075B604 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Trav7n-5A0A075B604 Gm45364-201ENSMUST00000210883 159 ntBASIC18.84■□□□□ 0.61
Trav7n-5A0A075B604 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
Trav7n-5A0A075B604 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav7n-5A0A075B604 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav7n-5A0A075B604 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7n-5A0A075B604 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7n-5A0A075B604 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.82■□□□□ 0.6
Trav7n-5A0A075B604 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.82■□□□□ 0.6
Trav7n-5A0A075B604 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7n-5A0A075B604 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7n-5A0A075B604 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trav7n-5A0A075B604 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav7n-5A0A075B604 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav7n-5A0A075B604 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.81■□□□□ 0.6
Trav7n-5A0A075B604 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav7n-5A0A075B604 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trav7n-5A0A075B604 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav7n-5A0A075B604 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav7n-5A0A075B604 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav7n-5A0A075B604 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav7n-5A0A075B604 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav7n-5A0A075B604 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.8■□□□□ 0.6
Trav7n-5A0A075B604 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav7n-5A0A075B604 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav7n-5A0A075B604 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trav7n-5A0A075B604 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav7n-5A0A075B604 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.79■□□□□ 0.6
Trav7n-5A0A075B604 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.79■□□□□ 0.6
Trav7n-5A0A075B604 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav7n-5A0A075B604 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav7n-5A0A075B604 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav7n-5A0A075B604 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
Trav7n-5A0A075B604 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav7n-5A0A075B604 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav7n-5A0A075B604 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav7n-5A0A075B604 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav7n-5A0A075B604 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.77■□□□□ 0.6
Trav7n-5A0A075B604 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trav7n-5A0A075B604 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.77■□□□□ 0.59
Trav7n-5A0A075B604 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Trav7n-5A0A075B604 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav7n-5A0A075B604 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav7n-5A0A075B604 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav7n-5A0A075B604 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.76■□□□□ 0.59
Trav7n-5A0A075B604 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav7n-5A0A075B604 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav7n-5A0A075B604 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav7n-5A0A075B604 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav7n-5A0A075B604 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav7n-5A0A075B604 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Trav7n-5A0A075B604 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav7n-5A0A075B604 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav7n-5A0A075B604 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.74■□□□□ 0.59
Trav7n-5A0A075B604 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Trav7n-5A0A075B604 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
Trav7n-5A0A075B604 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav7n-5A0A075B604 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trav7n-5A0A075B604 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav7n-5A0A075B604 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav7n-5A0A075B604 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav7n-5A0A075B604 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav7n-5A0A075B604 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav7n-5A0A075B604 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trav7n-5A0A075B604 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav7n-5A0A075B604 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav7n-5A0A075B604 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Trav7n-5A0A075B604 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav7n-5A0A075B604 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav7n-5A0A075B604 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav7n-5A0A075B604 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav7n-5A0A075B604 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav7n-5A0A075B604 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Trav7n-5A0A075B604 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav7n-5A0A075B604 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav7n-5A0A075B604 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.69■□□□□ 0.58
Trav7n-5A0A075B604 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.69■□□□□ 0.58
Trav7n-5A0A075B604 Terc-201ENSMUST00000082862 423 ntBASIC18.69■□□□□ 0.58
Trav7n-5A0A075B604 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav7n-5A0A075B604 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav7n-5A0A075B604 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trav7n-5A0A075B604 Gm9806-201ENSMUST00000051080 552 ntBASIC18.68■□□□□ 0.58
Trav7n-5A0A075B604 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav7n-5A0A075B604 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav7n-5A0A075B604 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav7n-5A0A075B604 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav7n-5A0A075B604 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav7n-5A0A075B604 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav7n-5A0A075B604 Scarna2-201ENSMUST00000157560 414 ntBASIC18.67■□□□□ 0.58
Trav7n-5A0A075B604 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav7n-5A0A075B604 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav7n-5A0A075B604 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.66■□□□□ 0.58
Trav7n-5A0A075B604 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav7n-5A0A075B604 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav7n-5A0A075B604 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav7n-5A0A075B604 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms