RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 CSE1LP55060 971 aaKnown RBP14.45□□□□□ -0.1
SYNE2-228ENST00000639659 ZNF169Q14929 603 aaPredicted RBP14.45□□□□□ -0.1
SYNE2-228ENST00000639659 PCM1Q15154 2024 aa14.45□□□□□ -0.1
SYNE2-228ENST00000639659 SP5Q6BEB4 398 aaPredicted RBP14.45□□□□□ -0.1
SYNE2-228ENST00000639659 MRPL14Q6P1L8 145 aaKnown RBP14.45□□□□□ -0.1
SYNE2-228ENST00000639659 FAM180AQ6UWF9 173 aa14.45□□□□□ -0.1
SYNE2-228ENST00000639659 LINC00696Q6ZRV3 163 aa14.45□□□□□ -0.1
SYNE2-228ENST00000639659 TAX1BP1Q86VP1 789 aa14.45□□□□□ -0.1
SYNE2-228ENST00000639659 PPP4R1Q8TF05 950 aa14.45□□□□□ -0.1
SYNE2-228ENST00000639659 ELMO1Q92556 727 aa14.45□□□□□ -0.1
SYNE2-228ENST00000639659 CHP1Q99653 195 aa14.45□□□□□ -0.1
SYNE2-228ENST00000639659 TBL1YQ9BQ87 522 aa14.45□□□□□ -0.1
SYNE2-228ENST00000639659 NHEJ1Q9H9Q4 299 aaPredicted RBP14.45□□□□□ -0.1
SYNE2-228ENST00000639659 CIDEBQ9UHD4 219 aa14.45□□□□□ -0.1
SYNE2-228ENST00000639659 PLCL2Q9UPR0 1127 aa14.45□□□□□ -0.1
SYNE2-228ENST00000639659 ENTPD4Q9Y227 616 aa14.45□□□□□ -0.1
SYNE2-228ENST00000639659 SNRNP200O75643 2136 aaKnown RBP14.45□□□□□ -0.1
SYNE2-228ENST00000639659 ZGRF1Q86YA3 2104 aa14.44□□□□□ -0.1
SYNE2-228ENST00000639659 H3BMH7 237 aa14.44□□□□□ -0.1
SYNE2-228ENST00000639659 STK10O94804 968 aaKnown RBP14.44□□□□□ -0.1
SYNE2-228ENST00000639659 ZRANB2O95218 330 aaKnown RBP eCLIP14.44□□□□□ -0.1
SYNE2-228ENST00000639659 UQCRHP07919 91 aa14.44□□□□□ -0.1
SYNE2-228ENST00000639659 EDN3P14138 238 aa14.44□□□□□ -0.1
SYNE2-228ENST00000639659 POU3F2P20265 443 aaPredicted RBP14.44□□□□□ -0.1
SYNE2-228ENST00000639659 RPA4Q13156 261 aa14.44□□□□□ -0.1
SYNE2-228ENST00000639659 RBBP7Q16576 425 aa14.44□□□□□ -0.1
SYNE2-228ENST00000639659 TAZQ16635 292 aa14.44□□□□□ -0.1
SYNE2-228ENST00000639659 RANBP10Q6VN20 620 aa14.44□□□□□ -0.1
SYNE2-228ENST00000639659 MCEMP1Q8IX19 187 aa14.44□□□□□ -0.1
SYNE2-228ENST00000639659 C2orf73Q8N5S3 287 aaPredicted RBP14.44□□□□□ -0.1
SYNE2-228ENST00000639659 DLG3Q92796 817 aa14.44□□□□□ -0.1
SYNE2-228ENST00000639659 BARD1Q99728 777 aaKnown RBP14.44□□□□□ -0.1
SYNE2-228ENST00000639659 AAR2Q9Y312 384 aaKnown RBP14.44□□□□□ -0.1
SYNE2-228ENST00000639659 ANKRD12Q6UB98 2062 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 DOCK10Q96BY6 2186 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 AGAP14A8MT82 685 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 KCNN4O15554 427 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 SNRPB2P08579 225 aaKnown RBP14.43□□□□□ -0.1
SYNE2-228ENST00000639659 TPM1P09493 284 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 MAGP20916 626 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 MMP11P24347 488 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 ADRA1AP35348 466 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 TSFMP43897 325 aaKnown RBP14.43□□□□□ -0.1
SYNE2-228ENST00000639659 DBN1Q16643 649 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 TUBB8Q3ZCM7 444 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 GPR33Q49SQ1 333 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 ANKRD20A2Q5SQ80 823 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 ANKRD20A1Q5TYW2 823 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 ANKRD20A3Q5VUR7 823 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 CDKL3Q8IVW4 592 aaPredicted RBP14.43□□□□□ -0.1
SYNE2-228ENST00000639659 PRSS58Q8IYP2 241 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 LMNTD1Q8N9Z9 388 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 CCDC110Q8TBZ0 833 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 FAR1Q8WVX9 515 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.43□□□□□ -0.1
SYNE2-228ENST00000639659 THOC3Q96J01 351 aaKnown RBP14.43□□□□□ -0.1
SYNE2-228ENST00000639659 DNAJC7Q99615 494 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 SLC22A11Q9NSA0 550 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 OLAHQ9NV23 265 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 PIH1D1Q9NWS0 290 aaKnown RBP14.43□□□□□ -0.1
SYNE2-228ENST00000639659 EURLQ9NYK6 297 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.43□□□□□ -0.1
SYNE2-228ENST00000639659 IMPACTQ9P2X3 320 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 COPG2Q9UBF2 871 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 ALG6Q9Y672 507 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 PRSS21Q9Y6M0 314 aa14.43□□□□□ -0.1
SYNE2-228ENST00000639659 POLEQ07864 2286 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 A0A1B0GX78 115 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 APOC4-APOC2K7ER74 178 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 SOCS6O14544 535 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 LIN7AO14910 233 aaPredicted RBP14.42□□□□□ -0.1
SYNE2-228ENST00000639659 APOC2P02655 101 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 TPH1P17752 444 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 MCM3P25205 808 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 PEBP1P30086 187 aaKnown RBP14.42□□□□□ -0.1
SYNE2-228ENST00000639659 SOX8P57073 446 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 KCNK10P57789 538 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 OTUD4Q01804 1114 aaKnown RBP14.42□□□□□ -0.1
SYNE2-228ENST00000639659 TRIM14Q14142 442 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 TLR1Q15399 786 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 ZNF658BQ4V348 819 aaPredicted RBP14.42□□□□□ -0.1
SYNE2-228ENST00000639659 DARS2Q6PI48 645 aaKnown RBP14.42□□□□□ -0.1
SYNE2-228ENST00000639659 KATNAL2Q8IYT4 538 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 TBC1D21Q8IYX1 336 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 RCOR2Q8IZ40 523 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 DNAJC22Q8N4W6 341 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 FLVCR1-AS1Q8TAF5 88 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 ACTL9Q8TC94 416 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 LRRC45Q96CN5 670 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 ALS2CR12Q96Q35 445 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 LHPPQ9H008 270 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 ABHD10Q9NUJ1 306 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 OR6C2Q9NZP2 312 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 CTSFQ9UBX1 484 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 POLG2Q9UHN1 485 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 HS3ST3B1Q9Y662 390 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 MAU2Q9Y6X3 613 aa14.42□□□□□ -0.1
SYNE2-228ENST00000639659 IGLV3-16A0A075B6K0 115 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 KDM1AO60341 852 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 JRKO75564 520 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms