RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 PRRT3Q5FWE3 981 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 LSM14AQ8ND56 463 aaKnown RBP17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 DISP2A7MBM2 1401 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 PRLRP16471 622 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 CHRNA4P43681 627 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 HCAR3P49019 387 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 CRHR2Q13324 411 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 RGS21Q2M5E4 152 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 ALG10Q5BKT4 473 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 PRPF38BQ5VTL8 546 aaKnown RBP17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 ASB18Q6ZVZ8 466 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 KCTD9Q7L273 389 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 PPP1R14DQ9NXH3 145 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 REV1Q9UBZ9 1251 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 C2CD2Q9Y426 696 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 ARPINQ7Z6K5 226 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 TDRPQ86YL5 185 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 ZNF565Q8N9K5 539 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 THRSPQ92748 146 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 TGM7Q96PF1 710 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 OR1F2PQ96R84 312 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 PCDH18Q9HCL0 1135 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 TRPV5Q9NQA5 729 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 COMMD3Q9UBI1 195 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 COMMD3-BMI1R4GMX3 469 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 BCKDKO14874 412 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 YY2O15391 372 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 JUNP05412 331 aaKnown RBP17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 ZNF41P51814 821 aaPredicted RBP17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 ZFP1Q6P2D0 407 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 PTF1AQ7RTS3 328 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 OR8H3Q8N146 312 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 OR6N1Q8NGY5 312 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 OR10A6Q8NH74 314 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 TM9SF2Q99805 663 aa17.52■□□□□ 0.4
CACNA1A-227ENST00000636549 INSIG1O15503 277 aa17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 NADKO95544 446 aaPredicted RBP17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 FMO3P31513 532 aa17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 MAGEA11P43364 429 aa17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 CDKL4Q5MAI5 379 aa17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 UBE2UQ5VVX9 321 aa17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 LNX1Q8TBB1 728 aaPredicted RBP17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 B3GAT2Q9NPZ5 323 aa17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 FKBP14Q9NWM8 211 aa17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 EIF3KQ9UBQ5 218 aaKnown RBP17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 INO80Q9ULG1 1556 aaPredicted RBP17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 CLUHO75153 1309 aa17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 TOR1BO14657 336 aa17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 CD48P09326 243 aa17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 POLR2CP19387 275 aaPredicted RBP17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 IGFN1Q86VF2 1251 aa17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 CCDC86Q9H6F5 360 aaKnown RBP17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 TAC3Q9UHF0 121 aa17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 PCYOX1Q9UHG3 505 aa17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 MAU2Q9Y6X3 613 aa17.52■□□□□ 0.39
CACNA1A-227ENST00000636549 IDO1P14902 403 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 SLC26A5P58743 744 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 PAOXQ6QHF9 649 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 AMER2Q8N7J2 671 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 SRFBP1Q8NEF9 429 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 ZNF700Q9H0M5 742 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 ISPDA4D126 451 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 OPN1SWP03999 348 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 DCTN2Q13561 401 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 LRRC69Q6ZNQ3 347 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 ZNF761Q86XN6 746 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 TBC1D15Q8TC07 691 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 FAM155AB1AL88 458 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 M0R036 132 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 POP4O95707 220 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 ENDOUP21128 410 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 CDK9P50750 372 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 CORO7P57737 925 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 ST3GAL1Q11201 340 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 TMEM119Q4V9L6 283 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 SPDYCQ5MJ68 293 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 REP15Q6BDI9 236 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 RASGEF1CQ8N431 466 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 FSTL5Q8N475 847 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 BSNDQ8WZ55 320 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 PTCD3Q96EY7 689 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 CIB1Q99828 191 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 C11orf84Q9BUA3 381 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 MRM3Q9HC36 420 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 ABCA6Q8N139 1617 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 PLOD2O00469 737 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 JUPP14923 745 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 FAM69BQ5VUD6 431 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 CYP2U1Q7Z449 544 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 TSEN2Q8NCE0 465 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 HINT2Q9BX68 163 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 PFDN2Q9UHV9 154 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 MAPRE3Q9UPY8 281 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 SYNGR4O95473 234 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 RHBDL3P58872 404 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 SUSD1Q6UWL2 747 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 QSOX2Q6ZRP7 698 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 TMCO2Q7Z6W1 182 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 FAM156AQ8NDB6 213 aa17.51■□□□□ 0.39
CACNA1A-227ENST00000636549 PIWIL2Q8TC59 973 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms