RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	PIGW	Q7Z7B1	504 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	LIX1	Q8N485	282 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ADAMTS15	Q8TE58	950 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	LPGAT1	Q92604	370 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	TFG	Q92734	400 aa	Predicted RBP	14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	PSKH2	Q96QS6	385 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	GDF15	Q99988	308 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	TMEM245	Q9H330	911 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	VPS4A	Q9UN37	437 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	MRPS33	Q9Y291	106 aa	Known RBP	14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	MYO10	Q9HD67	2058 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	FAM159B	A6NKW6	160 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	PLK4	O00444	970 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	NCK1	P16333	377 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	IDH3A	P50213	366 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	CLDN10	P78369	228 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	CBX3	Q13185	183 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	GNA13	Q14344	377 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	LPCAT4	Q643R3	524 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	TMEFF1	Q8IYR6	380 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	OR52J3	Q8NH60	311 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	DCBLD2	Q96PD2	775 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	VPS35	Q96QK1	796 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	NDEL1	Q9GZM8	345 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	INTS10	Q9NVR2	710 aa	Known RBP	14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997	MKL2	Q9ULH7	1088 aa		14.03	□□□□□ -0.16
NEDD4L-238	ENST00000635997		A0A0J9YVX5	310 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	SNTN	A6NMZ2	147 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ABLIM1	O14639	778 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	UROS	P10746	265 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ATP1A4	Q13733	1029 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ZNF542P	Q5EBM4	170 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	SMYD5	Q6GMV2	418 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	DPP10	Q8N608	796 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	FAM110B	Q8TC76	370 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997		K7EPI3	171 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	GTPBP1	O00178	669 aa	Known RBP	14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	LINC01565	O15544	149 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ARSA	P15289	507 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ZNF37A	P17032	561 aa	Predicted RBP	14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	TYRP1	P17643	537 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	DPP6	P42658	865 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	KHDC1	Q4VXA5	237 aa	Known RBP	14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	FAM78A	Q5JUQ0	283 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	LDLRAP1	Q5SW96	308 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	PLEKHM3	Q6ZWE6	761 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ARMC8	Q8IUR7	673 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	OVCA2	Q8WZ82	227 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	HSPA12B	Q96MM6	686 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	OR52B2	Q96RD2	323 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	CIB1	Q99828	191 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	SLC39A3	Q9BRY0	314 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	DNMT3B	Q9UBC3	853 aa	Known RBP	14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	PLAGL1	Q9UM63	463 aa		14.02	□□□□□ -0.16
NEDD4L-238	ENST00000635997	TTC34	A8MYJ7	566 aa		14.02	□□□□□ -0.17
NEDD4L-238	ENST00000635997	CHURC1-FNTB	B4DL54	471 aa		14.02	□□□□□ -0.17
NEDD4L-238	ENST00000635997	PCBP2	Q15366	365 aa	Known RBP eCLIP	14.02	□□□□□ -0.17
NEDD4L-238	ENST00000635997	BHLHB9	Q6PI77	547 aa		14.02	□□□□□ -0.17
NEDD4L-238	ENST00000635997	OR10A6	Q8NH74	314 aa		14.02	□□□□□ -0.17
NEDD4L-238	ENST00000635997	EDA	Q92838	391 aa		14.02	□□□□□ -0.17
NEDD4L-238	ENST00000635997	PMEPA1	Q969W9	287 aa		14.02	□□□□□ -0.17
NEDD4L-238	ENST00000635997	FCRL3	Q96P31	734 aa	Predicted RBP	14.02	□□□□□ -0.17
NEDD4L-238	ENST00000635997	TTLL2	Q9BWV7	592 aa		14.02	□□□□□ -0.17
NEDD4L-238	ENST00000635997	KRCC1	Q9NPI7	259 aa	Predicted RBP	14.02	□□□□□ -0.17
NEDD4L-238	ENST00000635997		A8MU76	341 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	DCLK1	O15075	740 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	TP73	O15350	636 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	PI15	O43692	258 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	KRT75	O95678	551 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	CD70	P32970	193 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	BDKRB1	P46663	353 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	HYAL2	Q12891	473 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	PTCHD3	Q3KNS1	767 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	LRIT3	Q3SXY7	679 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	POMGNT2	Q8NAT1	580 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	CNPPD1	Q9BV87	410 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	FOXQ1	Q9C009	403 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	DDX28	Q9NUL7	540 aa	Known RBP	14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	MAFK	O60675	156 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	IL6	P05231	212 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	PRSS56	P0CW18	603 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	ARSD	P51689	593 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	NCF4	Q15080	339 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	PRAMEF14	Q5SWL7	426 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997		Q8N9G6	341 aa	Predicted RBP	14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	OR9I1	Q8NGQ6	314 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	PAIP1	Q9H074	479 aa	Known RBP	14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	PCDHGA11	Q9Y5H2	935 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	AHCTF1	Q8WYP5	2266 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	TNRC6C	Q9HCJ0	1690 aa	Known RBP	14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	ANPEP	P15144	967 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	EIF2B2	P49770	351 aa	Known RBP	14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	MTPN	P58546	118 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	MTAP	Q13126	283 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	C1orf61	Q13536	156 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	SLBP	Q14493	270 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	SLC5A9	Q2M3M2	681 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	LIN52	Q52LA3	116 aa		14.01	□□□□□ -0.17
NEDD4L-238	ENST00000635997	LUZP2	Q86TE4	346 aa		14.01	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms