RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 RNF165Q6ZSG1 346 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 DPPA4Q7L190 304 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 GOLGA7Q7Z5G4 137 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 RBM23Q86U06 439 aaKnown RBP7□□□□□ -1.29
BRCA1-230ENST00000634433 TRAM1L1Q8N609 369 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 BPIFB1Q8TDL5 484 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 CYB5D2Q8WUJ1 264 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 VOPP1Q96AW1 172 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 CCDC124Q96CT7 223 aaKnown RBP7□□□□□ -1.29
BRCA1-230ENST00000634433 HIST1H2AHQ96KK5 128 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 DHRS1Q96LJ7 313 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 UHRF1Q96T88 793 aaPredicted RBP7□□□□□ -1.29
BRCA1-230ENST00000634433 NPAS2Q99743 824 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 HIST1H2AJQ99878 128 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 H2AFJQ9BTM1 129 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 CD244Q9BZW8 370 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 NOL11Q9H8H0 719 aaKnown RBP7□□□□□ -1.29
BRCA1-230ENST00000634433 TMEM165Q9HC07 324 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 ELOVL2Q9NXB9 296 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 CACNA2D2Q9NY47 1150 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 OPTCQ9UBM4 332 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 C16orf96A6NNT2 1141 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7□□□□□ -1.29
BRCA1-230ENST00000634433 K7EPI3 171 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 PSMD11O00231 422 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 ANGPT2O15123 496 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 WDR47O94967 919 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 ARHGEF15O94989 841 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 SLITRK5O94991 958 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 CNOT4O95628 575 aaKnown RBP7□□□□□ -1.29
BRCA1-230ENST00000634433 FTH1P02794 183 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 CA3P07451 260 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 PRR35P0CG20 571 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 PCNAP12004 261 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 ACADSP16219 412 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 ATP6V1C1P21283 382 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 FSHRP23945 695 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 AOAHP28039 575 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 AKT1P31749 480 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 MTHFRP42898 656 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 ERVK-8P63133 956 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 TRAP1Q12931 704 aaKnown RBP7□□□□□ -1.29
BRCA1-230ENST00000634433 MAD2L1Q13257 205 aaPredicted RBP7□□□□□ -1.29
BRCA1-230ENST00000634433 SP140Q13342 867 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 CCNIQ14094 377 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 FLOT2Q14254 428 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 EIF4HQ15056 248 aaKnown RBP7□□□□□ -1.29
BRCA1-230ENST00000634433 PDGFRLQ15198 375 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 DUSP6Q16828 381 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 ATP6AP1LQ52LC2 224 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 XKR7Q5GH72 579 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 SAMD4BQ5PRF9 694 aaKnown RBP7□□□□□ -1.29
BRCA1-230ENST00000634433 TCHHL1Q5QJ38 904 aaPredicted RBP7□□□□□ -1.29
BRCA1-230ENST00000634433 LDLRAP1Q5SW96 308 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 PAOXQ6QHF9 649 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 TRIM74Q86UV6 250 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 TRIM73Q86UV7 250 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 KBTBD6Q86V97 674 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 EPHX4Q8IUS5 362 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 PHYKPLQ8IUZ5 450 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 FAM156AQ8NDB6 213 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 LKAAEAR1Q8TD35 194 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 SMARCD2Q92925 531 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 PPP2R3CQ969Q6 453 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 NAF1Q96HR8 494 aaKnown RBP7□□□□□ -1.29
BRCA1-230ENST00000634433 MAGEB10Q96LZ2 347 aaPredicted RBP7□□□□□ -1.29
BRCA1-230ENST00000634433 KCNA7Q96RP8 456 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 WDR12Q9GZL7 423 aaKnown RBP7□□□□□ -1.29
BRCA1-230ENST00000634433 TUBB1Q9H4B7 451 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 IPPKQ9H8X2 491 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 SPAG4Q9NPE6 437 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 SDR39U1Q9NRG7 319 aaPredicted RBP7□□□□□ -1.29
BRCA1-230ENST00000634433 GDE1Q9NZC3 331 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 ADA2Q9NZK5 511 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 DEC1Q9P2X7 70 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 BTRCQ9Y297 605 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 TIMM22Q9Y584 194 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 PCDHGA4Q9Y5G9 962 aa7□□□□□ -1.29
BRCA1-230ENST00000634433 EDDM13A0A1B0GTR0 161 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 SLC28A1O00337 649 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 NUAK1O60285 661 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 STK16O75716 305 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 BCAS2O75934 225 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-230ENST00000634433 OR4F21O95013 312 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 ALDOCP09972 364 aaKnown RBP6.99□□□□□ -1.29
BRCA1-230ENST00000634433 MYOGP15173 224 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 ATP6V1B1P15313 513 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 CYP2A7P20853 494 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 HOXC12P31275 282 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 CA5AP35218 305 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 HNMTP50135 292 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 ERVPABLB-1P60509 514 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 FOXM1Q08050 763 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 FAPQ12884 760 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 GRB7Q14451 532 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 PDCD4Q53EL6 469 aaKnown RBP6.99□□□□□ -1.29
BRCA1-230ENST00000634433 ANKRD39Q53RE8 183 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 ISLR2Q6UXK2 745 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 TMEM92Q6UXU6 159 aa6.99□□□□□ -1.29
BRCA1-230ENST00000634433 GALNTL5Q7Z4T8 443 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms