RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 ANKS6Q68DC2 871 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 TMEM220Q6QAJ8 160 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 DBX2Q6ZNG2 339 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 USP30Q70CQ3 517 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 CUZD1Q86UP6 607 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 HEATR4Q86WZ0 1026 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 ZNF483Q8TF39 744 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 SKA2Q8WVK7 121 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 ASB11Q8WXH4 323 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 KLK6Q92876 244 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 TMEM159Q96B96 161 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 HIC2Q96JB3 615 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 ZNF514Q96K75 400 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 OR52B2Q96RD2 323 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 TMEM79Q9BSE2 394 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 CCM2Q9BSQ5 444 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 OR2AG1Q9H205 316 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 PTBP2Q9UKA9 531 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 ST14Q9Y5Y6 855 aa9.28□□□□□ -0.92
PDLIM5-223ENST00000627587 FRYQ5TBA9 3013 aa9.27□□□□□ -0.92
PDLIM5-223ENST00000627587 IGF2RP11717 2491 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 A0A1W2PQU0 124 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 PABPN1LA6NDY0 278 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 BCAT2O15382 392 aaPredicted RBP9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 VEGFDO43915 354 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 DIAPH2O60879 1101 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 MATN4O95460 622 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 PAK4O96013 591 aaPredicted RBP9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 FUCA1P04066 466 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 C8GP07360 202 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 VCLP18206 1134 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 TRIM23P36406 574 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 CDK3Q00526 305 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 CLCQ05315 142 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 INPP5AQ14642 412 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 IRF4Q15306 451 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 NEK10Q6ZWH5 1172 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 TRAPPC5Q8IUR0 188 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 SETD7Q8WTS6 366 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 RHBDF1Q96CC6 855 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 FAR2Q96K12 515 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 GPR174Q9BXC1 333 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 C1QTNF7Q9BXJ2 289 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 TEX101Q9BY14 249 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 WDR55Q9H6Y2 383 aaPredicted RBP9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 RDH14Q9HBH5 336 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 PREBQ9HCU5 417 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 DKK4Q9UBT3 224 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 EIF2B4Q9UI10 523 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 ZFP69BQ9UJL9 534 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 PCOLCE2Q9UKZ9 415 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 PDE10AQ9Y233 779 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 TNPO3Q9Y5L0 923 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 ZFHX4Q86UP3 3567 aa9.27□□□□□ -0.93
PDLIM5-223ENST00000627587 TBC1D3DA0A087WVF3 549 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 TBC1D3IA0A087WXS9 549 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 TBC1D3EA0A087X179 549 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 TBC1D3KA0A087X1G2 549 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 TBC1D3FA6NER0 549 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 CAPN14A8MX76 684 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 TBC1D3LB9A6J9 549 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 FCHO1O14526 889 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 CHUKO15111 745 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 FLRT2O43155 660 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 RNGTTO60942 597 aaKnown RBP9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 CBFA2T3O75081 653 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 GUCA1CO95843 209 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 ENO2P09104 434 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 TBC1D3HP0C7X1 549 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 MAOBP27338 520 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 TEAD1P28347 426 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 PDHA2P29803 388 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 ACSL1P33121 698 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 IGFALSP35858 605 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 PREPP48147 710 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 TPMTP51580 245 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 SP140Q13342 867 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 PCBP2Q15366 365 aaKnown RBP eCLIP9.26□□□□□ -0.931e-6■■■■■ 81.2
PDLIM5-223ENST00000627587 FAM91A1Q658Y4 838 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 TBC1D3GQ6DHY5 549 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 CLEC6AQ6EIG7 209 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 TBC1D3CQ6IPX1 549 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 NEK5Q6P3R8 708 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 UBE2R2Q712K3 238 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 TMPRSS7Q7RTY8 843 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 HORMAD1Q86X24 394 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 TREML1Q86YW5 311 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 TBC1D3Q8IZP1 549 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 GALNT15Q8N3T1 639 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 OR2I1PQ8NGU4 316 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 TRPC4APQ8TEL6 797 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 AGAP11Q8TF27 550 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 MAELQ96JY0 434 aaKnown RBP9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 LINC00615Q96LM1 132 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 PPP1R36Q96LQ0 422 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 CAMK1GQ96NX5 476 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 KCNA7Q96RP8 456 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 EGFL8Q99944 293 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 SLC12A9Q9BXP2 914 aa9.26□□□□□ -0.93
PDLIM5-223ENST00000627587 TRIM54Q9BYV2 358 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms