RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 KLHL20Q9Y2M5 609 aa14.12□□□□□ -0.15
PNKP-218ENST00000625299 HS3ST3B1Q9Y662 390 aa14.12□□□□□ -0.15
PNKP-218ENST00000625299 A0A1B0GX78 115 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 C5orf60A6NFR6 353 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 CRTAMO95727 393 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 GYPCP04921 128 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 PRSS56P0CW18 603 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 COX6B1P14854 86 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 ITGAXP20702 1163 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 MC4RP32245 332 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 PBX1P40424 430 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 CDKN2BP42772 138 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 CDKN1CP49918 316 aaPredicted RBP14.11□□□□□ -0.15
PNKP-218ENST00000625299 ARG2P78540 354 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 FANCCQ00597 558 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 RPA4Q13156 261 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 SLC18A3Q16572 532 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 NKG7Q16617 165 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 FCRL6Q6DN72 434 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 KIRREL2Q6UWL6 708 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 ISLR2Q6UXK2 745 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 TAS2R42Q7RTR8 314 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 DNAJC22Q8N4W6 341 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 CLDN19Q8N6F1 224 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 METTL27Q8N6F8 245 aaPredicted RBP14.11□□□□□ -0.15
PNKP-218ENST00000625299 CCDC168Q8NDH2 2452 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.11□□□□□ -0.15
PNKP-218ENST00000625299 ITLN2Q8WWU7 325 aaPredicted RBP14.11□□□□□ -0.15
PNKP-218ENST00000625299 FKBP10Q96AY3 582 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 QKIQ96PU8 341 aaKnown RBP eCLIP14.11□□□□□ -0.15
PNKP-218ENST00000625299 SPSB2Q99619 263 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 C10orf88Q9H8K7 445 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 ZDHHC3Q9NYG2 299 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 EURLQ9NYK6 297 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 SH3BGRL2Q9UJC5 107 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 KLF2Q9Y5W3 355 aaPredicted RBP14.11□□□□□ -0.15
PNKP-218ENST00000625299 SETD2Q9BYW2 2564 aaPredicted RBP14.11□□□□□ -0.15
PNKP-218ENST00000625299 ZFHX3Q15911 3703 aa14.11□□□□□ -0.15
PNKP-218ENST00000625299 AGAP14A8MT82 685 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 SPOPO43791 374 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 ANXA9O76027 345 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 KLHL18O94889 574 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 PIM1P11309 404 aaPredicted RBP14.1□□□□□ -0.15
PNKP-218ENST00000625299 HTR1EP28566 365 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 PTGER4P35408 488 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 ARHGAP25P42331 645 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 UBASH3AP57075 661 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 MFAP5Q13361 173 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 ZNF658BQ4V348 819 aaPredicted RBP14.1□□□□□ -0.15
PNKP-218ENST00000625299 LRRC38Q5VT99 294 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 GFRALQ6UXV0 394 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 OVCH1Q7RTY7 1134 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 MRGPRGQ86SM5 289 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 SERPINA9Q86WD7 417 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 FLVCR1-AS1Q8TAF5 88 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 RELTQ969Z4 430 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 NACC2Q96BF6 587 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 GORASP1Q9BQQ3 440 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 ANP32EQ9BTT0 268 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 CHRNA10Q9GZZ6 450 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 GBA3Q9H227 469 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 MRM3Q9HC36 420 aaKnown RBP14.1□□□□□ -0.15
PNKP-218ENST00000625299 CTSFQ9UBX1 484 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 TRHDEQ9UKU6 1024 aa14.1□□□□□ -0.15
PNKP-218ENST00000625299 GOLGA6L22H0YM25 854 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 CCL21O00585 134 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 PCDH17O14917 1159 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 AKR1B10O60218 316 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 MBD3O95983 291 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 UQCRHP07919 91 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 MAGP20916 626 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 COMTP21964 271 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 MCM3P25205 808 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 ACRV1P26436 265 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 PEBP1P30086 187 aaKnown RBP14.09□□□□□ -0.15
PNKP-218ENST00000625299 ZNF140P52738 457 aaPredicted RBP14.09□□□□□ -0.15
PNKP-218ENST00000625299 ARSFP54793 590 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 TPM4P67936 248 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 SRSF11Q05519 484 aaKnown RBP14.09□□□□□ -0.15
PNKP-218ENST00000625299 Q0VFX4 171 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 SLC5A12Q1EHB4 618 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 SYTL3Q4VX76 610 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 VWA2Q5GFL6 755 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 ITPRIPL1Q6GPH6 555 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 NAPRTQ6XQN6 538 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 COX15Q7KZN9 410 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 CCDC50Q8IVM0 306 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 OR11G2Q8NGC1 345 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 ELMO1Q92556 727 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 IQCDQ96DY2 449 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 CCDC120Q96HB5 630 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 VPS50Q96JG6 964 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 MESP1Q9BRJ9 268 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 WDR54Q9H977 334 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 ZNF160Q9HCG1 818 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 CUTCQ9NTM9 273 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 PLA2G3Q9NZ20 509 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 OR6C2Q9NZP2 312 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 POLG2Q9UHN1 485 aa14.09□□□□□ -0.15
PNKP-218ENST00000625299 HIVEP1P15822 2718 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms