RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 TXNDC16Q9P2K2 825 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 EPHA6Q9UF33 1036 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 ACSL5Q9ULC5 683 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 B3GALT1Q9Y5Z6 326 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 MGAQ8IWI9 3026 aa12.34□□□□□ -0.43
PNKP-217ENST00000625216 OR2AG2A6NM03 316 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 OR52A4PA6NMU1 304 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 A8MU76 341 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 CFAP99D6REC4 459 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 POLR3GO15318 223 aaPredicted RBP12.33□□□□□ -0.44
PNKP-217ENST00000625216 CD3EAPO15446 510 aaKnown RBP12.33□□□□□ -0.44
PNKP-217ENST00000625216 RFPL1O75677 317 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 KRT38O76015 456 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 S1PR4O95977 384 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 AHSGP02765 367 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 ITGALP20701 1170 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 CNTFP26441 200 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 HPDP32754 393 aaPredicted RBP12.33□□□□□ -0.44
PNKP-217ENST00000625216 SPRP35270 261 aaPredicted RBP12.33□□□□□ -0.44
PNKP-217ENST00000625216 CCNFP41002 786 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 CD151P48509 253 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 C19orf57Q0VDD7 668 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 ZRANB3Q5FWF4 1079 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 CNSTQ6PJW8 725 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 CEACAM20Q6UY09 585 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 SNX20Q7Z614 316 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 GALNT7Q86SF2 657 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 PIANPQ8IYJ0 282 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 C4orf33Q8N1A6 199 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 OR2L2Q8NH16 312 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 TTC9Q92623 222 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 ISL2Q96A47 359 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 SGF29Q96ES7 293 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 ZDHHC12Q96GR4 267 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 SGSM3Q96HU1 749 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 COPS8Q99627 209 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 GPR22Q99680 433 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 FAM96AQ9H5X1 160 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 WDR70Q9NW82 654 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 CRLS1Q9UJA2 301 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 WDR37Q9Y2I8 494 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 MTO1Q9Y2Z2 717 aaKnown RBP12.33□□□□□ -0.44
PNKP-217ENST00000625216 ACTL7BQ9Y614 415 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 SLC30A1Q9Y6M5 507 aa12.33□□□□□ -0.44
PNKP-217ENST00000625216 C17orf113A0A1B0GUU1 675 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 GOLGA8RI6L899 631 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 POLR1CO15160 346 aaPredicted RBP12.32□□□□□ -0.44
PNKP-217ENST00000625216 CAPN5O15484 640 aaPredicted RBP12.32□□□□□ -0.44
PNKP-217ENST00000625216 HAUS5O94927 633 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 ALDOAP04075 364 aaKnown RBP12.32□□□□□ -0.44
PNKP-217ENST00000625216 TYRP1P17643 537 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 MAGEA12P43365 314 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 LEPRP48357 1165 aaKnown RBP12.32□□□□□ -0.44
PNKP-217ENST00000625216 GYS2P54840 703 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 PPP2R2AP63151 447 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 GPR18Q14330 331 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 NFE2L1Q14494 772 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 RPE65Q16518 533 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 FASTKD1Q53R41 847 aaKnown RBP12.32□□□□□ -0.44
PNKP-217ENST00000625216 RBM20Q5T481 1227 aaKnown RBP12.32□□□□□ -0.44
PNKP-217ENST00000625216 MRNIPQ6NTE8 343 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 PCSK4Q6UW60 755 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 TIFABQ6ZNK6 161 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 SH2D5Q6ZV89 423 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 CMC1Q7Z7K0 106 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 NXPE1Q8N323 547 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 GABPB2Q8TAK5 448 aaPredicted RBP12.32□□□□□ -0.44
PNKP-217ENST00000625216 FAM76AQ8TAV0 307 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 NKD1Q969G9 470 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 MTBPQ96DY7 904 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 SELENOSQ9BQE4 189 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 CCM2Q9BSQ5 444 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 SPRY4Q9C004 299 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 ZDHHC3Q9NYG2 299 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 SENP1Q9P0U3 644 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 KLHL3Q9UH77 587 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 PIKFYVEQ9Y2I7 2098 aa12.32□□□□□ -0.44
PNKP-217ENST00000625216 TRBV5-4A0A0C4DH59 114 aa12.31□□□□□ -0.44
PNKP-217ENST00000625216 FAM95CA0A1B0GW59 222 aa12.31□□□□□ -0.44
PNKP-217ENST00000625216 SPAG7O75391 227 aa12.31□□□□□ -0.44
PNKP-217ENST00000625216 MT-ND3P03897 115 aa12.31□□□□□ -0.44
PNKP-217ENST00000625216 ITGB2P05107 769 aa12.31□□□□□ -0.44
PNKP-217ENST00000625216 GSTM1P09488 218 aa12.31□□□□□ -0.44
PNKP-217ENST00000625216 PYGBP11216 843 aa12.31□□□□□ -0.44
PNKP-217ENST00000625216 ATP1B2P14415 290 aaPredicted RBP12.31□□□□□ -0.44
PNKP-217ENST00000625216 KRT4P19013 534 aa12.31□□□□□ -0.44
PNKP-217ENST00000625216 MAP4P27816 1152 aaKnown RBP12.31□□□□□ -0.44
PNKP-217ENST00000625216 GMPRP36959 345 aa12.31□□□□□ -0.44
PNKP-217ENST00000625216 CAPZBP47756 277 aa12.31□□□□□ -0.44
PNKP-217ENST00000625216 SERPINB8P50452 374 aa12.31□□□□□ -0.44
PNKP-217ENST00000625216 CSRP3P50461 194 aa12.31□□□□□ -0.44
PNKP-217ENST00000625216 GSTM4Q03013 218 aa12.31□□□□□ -0.44
PNKP-217ENST00000625216 SLC18A2Q05940 514 aa12.31□□□□□ -0.44
PNKP-217ENST00000625216 CACNG1Q06432 222 aa12.31□□□□□ -0.44
PNKP-217ENST00000625216 COL9A2Q14055 689 aaPredicted RBP12.31□□□□□ -0.44
PNKP-217ENST00000625216 DBN1Q16643 649 aa12.31□□□□□ -0.44
PNKP-217ENST00000625216 LGSNQ5TDP6 509 aa12.31□□□□□ -0.44
PNKP-217ENST00000625216 ANKS6Q68DC2 871 aa12.31□□□□□ -0.44
PNKP-217ENST00000625216 CYB5D1Q6P9G0 228 aa12.31□□□□□ -0.44
PNKP-217ENST00000625216 FAM83HQ6ZRV2 1179 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms