RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 RFTN1Q14699 578 aaPredicted RBP8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 PARP15Q460N3 678 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 RAB41Q5JT25 222 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 PHF19Q5T6S3 580 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 TMEM26Q6ZUK4 368 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 BEND5Q7L4P6 421 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 LPCAT2Q7L5N7 544 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 KRT73Q86Y46 540 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 CADM2Q8N3J6 435 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 RTL3Q8N8U3 475 aaKnown RBP8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 TMEM102Q8N9M5 508 aaPredicted RBP8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 FBXO15Q8NCQ5 510 aaPredicted RBP8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 TNIP2Q8NFZ5 429 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 RMND5BQ96G75 393 aaPredicted RBP8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 GAL3ST1Q99999 423 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 ZNF385DQ9H6B1 395 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 ATXN10Q9UBB4 475 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 CACNA1HO95180 2353 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 LOC285556D6RIA3 1793 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 HHLA1C9JL84 531 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 PDLIM1O00151 329 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 SLC28A2O43868 658 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 DEAF1O75398 565 aaPredicted RBP8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 INMTO95050 263 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 ITGB1P05556 798 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 PGFP49763 221 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 PCDH1Q08174 1060 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 C2orf80Q0P641 193 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 ACAP2Q15057 778 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 TRIP4Q15650 581 aaPredicted RBP8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 CCNYL2Q5T2Q4 361 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 LIMS2Q7Z4I7 341 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 ZDHHC13Q8IUH4 622 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 SPPL2CQ8IUH8 684 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 OR5M3Q8NGP4 307 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 BPIFB1Q8TDL5 484 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 VPS33AQ96AX1 596 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 TMIGD2Q96BF3 282 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 C19orf60Q96EN9 201 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 SLC45A3Q96JT2 553 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 ADPRHL2Q9NX46 363 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 SUCOQ9UBS9 1254 aaKnown RBP8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 MYRFQ9Y2G1 1151 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 A0A0J9YYE9 177 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 CCDC162PA2VCL2 907 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 KLHL33A6NCF5 533 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 PPP6CO00743 305 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 SGTAO43765 313 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 CNOT3O75175 753 aaKnown RBP8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 RPP40O75818 363 aaKnown RBP8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 OR4F21O95013 312 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 BMP10O95393 424 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 OTCP00480 354 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 HNRNPCP07910 306 aaKnown RBP eCLIP8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 COL6A1P12109 1028 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 CAPN13Q6MZZ7 669 aaPredicted RBP8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 USP53Q70EK8 1073 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 LRRTM3Q86VH5 581 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 CNTN4Q8IWV2 1026 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 RNF168Q8IYW5 571 aaPredicted RBP8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 FAM9CQ8IZT9 166 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 METTL27Q8N6F8 245 aaPredicted RBP8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 SMYD1Q8NB12 490 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 BPIFB6Q8NFQ5 453 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 REPS1Q96D71 796 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 TSGA13Q96PP4 275 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 RBCK1Q9BYM8 510 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 POLMQ9NP87 494 aaPredicted RBP8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 INTS7Q9NVH2 962 aaKnown RBP8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 CA14Q9ULX7 337 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 ROS1P08922 2347 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 LATO43561 262 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 OR10H3O60404 316 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 ZNF26P17031 533 aaPredicted RBP8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 ARSDP51689 593 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 CDKN2DP55273 166 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 CDH4P55283 916 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 HMGCS1Q01581 520 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 RGS1Q08116 209 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 TAF13Q15543 124 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 PIK3R6Q5UE93 754 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 CNKSR3Q6P9H4 555 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 RANBP10Q6VN20 620 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 ZNF655Q8N720 491 aaPredicted RBP8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 DPYSL5Q9BPU6 564 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 OSBPL11Q9BXB4 747 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 SEZ6LQ9BYH1 1024 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 ZNF696Q9H7X3 374 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 POLR3BQ9NW08 1133 aaPredicted RBP8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 RAPGEFL1Q9UHV5 662 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 OGDHLQ9ULD0 1010 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 GPR179Q6PRD1 2367 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 MTMR11A4FU01 709 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 AP1G1O43747 822 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 TGFB1P01137 390 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 TRBC1P01850 177 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 POU2F1P14859 743 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 PCSK6P29122 969 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 PTSQ03393 145 aa8.11□□□□□ -1.11
PTPDC1-204ENST00000620992 LRP8Q14114 963 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms