RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ZNF248Q8NDW4 579 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 PHC3Q8NDX5 983 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 FBXO36Q8NEA4 188 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 FAM46DQ8NEK8 389 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 GPR150Q8NGU9 434 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 WDR36Q8NI36 951 aaKnown RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 GDAP1Q8TB36 358 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 ACMSDQ8TDX5 336 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 SLC37A2Q8TED4 501 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 SNRNP27Q8WVK2 155 aaKnown RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 ZCCHC14Q8WYQ9 949 aaKnown RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 LPGAT1Q92604 370 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 ZNF75CPQ92670 426 aaPredicted RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 ULK4Q96C45 1275 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 LINC00615Q96LM1 132 aaPredicted RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 C9orf72Q96LT7 481 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 BIRC8Q96P09 236 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 TEFMQ96QE5 360 aaKnown RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 GFM1Q96RP9 751 aaKnown RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 COPS8Q99627 209 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 SLC30A3Q99726 388 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 CMKLR1Q99788 373 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 CCDC28BQ9BUN5 200 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 ASPSCR1Q9BZE9 553 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 RAB33BQ9H082 229 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 P2RY12Q9H244 342 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 C1orf21Q9H246 121 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 DPEP2Q9H4A9 486 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 MANSC1Q9H8J5 431 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 SAYSD1Q9NPB0 183 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 PRDM8Q9NQV8 689 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 CATSPERZQ9NTU4 200 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 MKS1Q9NXB0 559 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 SIRPGQ9P1W8 387 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 PDP2Q9P2J9 529 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 FAM8A1Q9UBU6 413 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 ACSL5Q9ULC5 683 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 DNAJC16Q9Y2G8 782 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 C15orf41Q9Y2V0 281 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 HEBP2Q9Y5Z4 205 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 PSAT1Q9Y617 370 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 SEC16AO15027 2179 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 COL6A6A6NMZ7 2263 aa5.13□□□□□ -1.59
SHMT1-211ENST00000618902 COL27A1Q8IZC6 1860 aaPredicted RBP5.13□□□□□ -1.59
SHMT1-211ENST00000618902 ANKRD12Q6UB98 2062 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 CCDC187A0A096LP49 1063 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 MAGEB16A2A368 324 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 MGAT4DA6NG13 374 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 LILRA5A6NI73 299 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 SMIM23A6NLE4 172 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 OR52A4PA6NMU1 304 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 RHPN2P1A8MT19 583 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 B4DGG1 531 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 D6RAR5 112 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 MATN2O00339 956 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 PFDN6O15212 129 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 PPM1DO15297 605 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 CAPN5O15484 640 aaPredicted RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 B4GAT1O43505 415 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 KDM1AO60341 852 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 SNX2O60749 519 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 NIPSNAP2O75323 286 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 HAUS5O94927 633 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 AP2A2O94973 939 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 INHBAP08476 426 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 SNRPAP09012 282 aaKnown RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 NEFHP12036 1026 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 F3P13726 295 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 ATP1B2P14415 290 aaPredicted RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 KRT4P19013 534 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 PDHA2P29803 388 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 SSTR1P30872 391 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 AKT1P31749 480 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 CCR7P32248 378 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 SLC19A1P41440 591 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 ACTR1BP42025 376 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 SLC1A2P43004 574 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 PREPP48147 710 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 INHBCP55103 352 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 PCBP4P57723 403 aaKnown RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 ACTR1AP61163 376 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 UBE2IP63279 158 aaKnown RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 PRAMEP78395 509 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 MRPS35P82673 323 aaKnown RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 ZFP36L1Q07352 338 aaKnown RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 RPA4Q13156 261 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 CTBP1Q13363 440 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 BIRC2Q13490 618 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 GTF2H3Q13889 308 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 CLCA4Q14CN2 919 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 EFTUD2Q15029 972 aaKnown RBP eCLIP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 INSCQ1MX18 579 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 TSNAXIP1Q2TAA8 658 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 TBC1D25Q3MII6 688 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 FASTKD1Q53R41 847 aaKnown RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 SPANXN3Q5MJ09 141 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 RBM20Q5T481 1227 aaKnown RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 TEDDM1Q5T9Z0 273 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 BROXQ5VW32 411 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms