RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 HERV-K104P61576 105 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 PSMC6P62333 389 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 TRA2BP62995 288 aaKnown RBP2.35□□□□□ -2.03
TARDBP-220ENST00000618606 CREB5Q02930 508 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 CALCOCO2Q13137 446 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 CUL4AQ13619 759 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 EIF4A2Q14240 407 aaKnown RBP2.35□□□□□ -2.03
TARDBP-220ENST00000618606 TAF13Q15543 124 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 RILPL1Q5EBL4 403 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 RARS2Q5T160 578 aaKnown RBP2.35□□□□□ -2.03
TARDBP-220ENST00000618606 ADALQ6DHV7 355 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 IKBIPQ70UQ0 350 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 SZRD1Q7Z422 152 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 TTC39CQ8N584 583 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 GPATCH11Q8N954 259 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 C17orf47Q8NEP4 570 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 KBTBD8Q8NFY9 601 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 USP6NLQ92738 828 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 NUDCD1Q96RS6 583 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 SLF1Q9BQI6 1058 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 TRAF4Q9BUZ4 470 aaPredicted RBP2.35□□□□□ -2.03
TARDBP-220ENST00000618606 FTOQ9C0B1 505 aaKnown RBP eCLIP2.35□□□□□ -2.03
TARDBP-220ENST00000618606 CCDC68Q9H2F9 335 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 EIF2B3Q9NR50 452 aaKnown RBP2.35□□□□□ -2.03
TARDBP-220ENST00000618606 SDR39U1Q9NRG7 319 aaPredicted RBP2.35□□□□□ -2.03
TARDBP-220ENST00000618606 MRGBPQ9NV56 204 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 PANK4Q9NVE7 773 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 NFKBIL1Q9UBC1 381 aaPredicted RBP2.35□□□□□ -2.03
TARDBP-220ENST00000618606 GIMAP2Q9UG22 337 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 MUTYHQ9UIF7 546 aa2.35□□□□□ -2.03
TARDBP-220ENST00000618606 MAGED1Q9Y5V3 778 aaPredicted RBP2.35□□□□□ -2.03
TARDBP-220ENST00000618606 SPIN1Q9Y657 262 aaPredicted RBP2.35□□□□□ -2.03
TARDBP-220ENST00000618606 HCFC1P51610 2035 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 FAM237BA0A1B0GVD1 139 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 SRRM5B3KS81 715 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 DFFBO76075 338 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 PGM3O95394 542 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 ADRB2P07550 413 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 SPARCP09486 303 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 CLTBP09497 229 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 HSPA1AP0DMV8 641 aaKnown RBP2.34□□□□□ -2.03
TARDBP-220ENST00000618606 HSPA1BP0DMV9 641 aaKnown RBP2.34□□□□□ -2.03
TARDBP-220ENST00000618606 ACTN1P12814 892 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 LAMP2P13473 410 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 CYP2A7P20853 494 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 TM4SF1P30408 202 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 OPRL1P41146 370 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 LEPRP48357 1165 aaKnown RBP2.34□□□□□ -2.03
TARDBP-220ENST00000618606 B3GALT5-AS1P59052 145 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 IFI35P80217 286 aaPredicted RBP2.34□□□□□ -2.03
TARDBP-220ENST00000618606 MC1RQ01726 317 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 FASTKD3Q14CZ7 662 aaKnown RBP2.34□□□□□ -2.03
TARDBP-220ENST00000618606 PCGF3Q3KNV8 242 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 KLHL26Q53HC5 615 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 TMEM198Q66K66 360 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 KRT77Q7Z794 578 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 ADGRA1Q86SQ6 560 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 MARCH9Q86YJ5 346 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 HPS6Q86YV9 775 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 WDTC1Q8N5D0 677 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 Q8NBF4 154 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 OR10G8Q8NGN5 311 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 ZNF519Q8TB69 540 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 ARHGAP45Q92619 1136 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 ZKSCAN4Q969J2 545 aaPredicted RBP2.34□□□□□ -2.03
TARDBP-220ENST00000618606 NSUN4Q96CB9 384 aaKnown RBP2.34□□□□□ -2.03
TARDBP-220ENST00000618606 FNBP1Q96RU3 617 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 RPP25Q9BUL9 199 aaKnown RBP2.34□□□□□ -2.03
TARDBP-220ENST00000618606 ABHD6Q9BV23 337 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 ALDH8A1Q9H2A2 487 aaPredicted RBP2.34□□□□□ -2.03
TARDBP-220ENST00000618606 ARRDC1-AS1Q9H2J1 176 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 PDCL3Q9H2J4 239 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 ZCCHC17Q9NP64 241 aaKnown RBP2.34□□□□□ -2.03
TARDBP-220ENST00000618606 A4GALTQ9NPC4 353 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 SH3GLB2Q9NR46 395 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 DIAPH3Q9NSV4 1193 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 ZDHHC2Q9UIJ5 367 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 RPS6KA6Q9UK32 745 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 ZNF215Q9UL58 517 aaPredicted RBP2.34□□□□□ -2.03
TARDBP-220ENST00000618606 CORO1CQ9ULV4 474 aaPredicted RBP2.34□□□□□ -2.03
TARDBP-220ENST00000618606 EXO1Q9UQ84 846 aaKnown RBP2.34□□□□□ -2.03
TARDBP-220ENST00000618606 ANGPTL3Q9Y5C1 460 aa2.34□□□□□ -2.03
TARDBP-220ENST00000618606 C15orf61A6NNL5 157 aa2.33□□□□□ -2.04
TARDBP-220ENST00000618606 PTGES3LE9PB15 166 aa2.33□□□□□ -2.04
TARDBP-220ENST00000618606 VILLO15195 856 aa2.33□□□□□ -2.04
TARDBP-220ENST00000618606 NDUFS4O43181 175 aa2.33□□□□□ -2.04
TARDBP-220ENST00000618606 GPC4O75487 556 aa2.33□□□□□ -2.04
TARDBP-220ENST00000618606 ERAL1O75616 437 aaKnown RBP2.33□□□□□ -2.04
TARDBP-220ENST00000618606 GH2P01242 217 aa2.33□□□□□ -2.04
TARDBP-220ENST00000618606 CSH1P0DML2 217 aa2.33□□□□□ -2.04
TARDBP-220ENST00000618606 CSH2P0DML3 217 aa2.33□□□□□ -2.04
TARDBP-220ENST00000618606 RARGP13631 454 aa2.33□□□□□ -2.04
TARDBP-220ENST00000618606 BSGP35613 385 aa2.33□□□□□ -2.04
TARDBP-220ENST00000618606 ARL3P36405 182 aa2.33□□□□□ -2.04
TARDBP-220ENST00000618606 GARSP41250 739 aaKnown RBP2.33□□□□□ -2.04
TARDBP-220ENST00000618606 PNRC1Q12796 327 aaPredicted RBP2.33□□□□□ -2.04
TARDBP-220ENST00000618606 MAMLD1Q13495 774 aa2.33□□□□□ -2.04
TARDBP-220ENST00000618606 WTAPQ15007 396 aa2.33□□□□□ -2.04
TARDBP-220ENST00000618606 E2F5Q15329 346 aa2.33□□□□□ -2.04
TARDBP-220ENST00000618606 FAM133BQ5BKY9 247 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms