RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 PHC3Q8NDX5 983 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 ITPKCQ96DU7 683 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 RC3H2Q9HBD1 1191 aaKnown RBP10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 PCDHAC2Q9Y5I4 1007 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 MAFBQ9Y5Q3 323 aaPredicted RBP10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 DENRO43583 198 aaKnown RBP10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 APOC1P02654 83 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 C7P10643 843 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 CLK3P49761 638 aaKnown RBP10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 XKP51811 444 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 NUDT6P53370 316 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 TAF1AQ15573 450 aaPredicted RBP10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 GPALPP1Q8IXQ4 340 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 TMEM192Q8IY95 271 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 KLHL36Q8N4N3 616 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 NAT16Q8N8M0 369 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 CHST4Q8NCG5 386 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 OR10H5Q8NGA6 315 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 OR4C6Q8NH72 309 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 GPR152Q8TDT2 470 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 NTAN1Q96AB6 310 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 CDCA5Q96FF9 252 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 FERD3LQ96RJ6 166 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 DPEP3Q9H4B8 488 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 SLC27A6Q9Y2P4 619 aa10.46□□□□□ -0.74
CLTCL1-209ENST00000617103 A0A1W2PQ67 120 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 A6NHS1 94 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 H0YJX3 145 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 TLR4O00206 839 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 SLITRK5O94991 958 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 NPPAP01160 153 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 AHSGP02765 367 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 DGKQP52824 942 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 RFTN1Q14699 578 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 TCEAL1Q15170 157 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 TARBP2Q15633 366 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 CRB2Q5IJ48 1285 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 FAM91A1Q658Y4 838 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 NCBP2-AS2Q69YL0 99 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 ASRGL1Q7L266 308 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 ATCAYQ86WG3 371 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 MARCH9Q86YJ5 346 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 TMIEQ8NEW7 156 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 SOCS4Q8WXH5 440 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 SLC9A6Q92581 669 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 CST11Q9H112 138 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 MFSD1Q9H3U5 465 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 EVLQ9UI08 416 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 RIMKLBQ9ULI2 386 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 MRPS33Q9Y291 106 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 MAU2Q9Y6X3 613 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 FGF3P11487 239 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 SCNN1AP37088 669 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 NDUFV1P49821 464 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 RABL3Q5HYI8 236 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 SLC2A7Q6PXP3 512 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 CXCL17Q6UXB2 119 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 BEND7Q8N7W2 519 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 ZNF516Q92618 1163 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 DNASE1L2Q92874 299 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 PSMG2Q969U7 264 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 SPACA7Q96KW9 195 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 SIGLEC10Q96LC7 697 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 MUS81Q96NY9 551 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 OR51V1Q9H2C8 321 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 TCF7L1Q9HCS4 588 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 FLRT1Q9NZU1 646 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 SNX10Q9Y5X0 201 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 SMIM35A0A1B0GVV1 85 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 ANXA2P2A6NMY6 339 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 M0R2N6 131 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 FFAR2O15552 330 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 ANXA2P07355 339 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 STOMP27105 288 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 ADAM15Q13444 863 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 VGLL4Q14135 290 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 UBAP2Q5T6F2 1119 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 KLHL35Q6PF15 583 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 PAMR1Q6UXH9 720 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 TMEM203Q969S6 136 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 PYURFQ96I23 114 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 CNDP2Q96KP4 475 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 MAPKAP1Q9BPZ7 522 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 TMEM106CQ9BVX2 250 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 FKBP7Q9Y680 259 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 DLGAP1O14490 977 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 HMGN1P05114 100 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 CYP3A5P20815 502 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 TXNL4AP83876 142 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 PRR5P85299 388 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 HMGCS1Q01581 520 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 ABHD18Q0P651 414 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 ANKDD1AQ495B1 522 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 RANBP3LQ86VV4 465 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 GALNT6Q8NCL4 622 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 BPIFB1Q8TDL5 484 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 PPP1R13LQ8WUF5 828 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 MND1Q9BWT6 205 aa10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 GTPBP2Q9BX10 602 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-209ENST00000617103 ADAMTS10Q9H324 1103 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms