RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 MBOAT1Q6ZNC8 495 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 CHSY3Q70JA7 882 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 MILR1Q7Z6M3 343 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 C11orf96Q7Z7L8 435 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 LRRTM4Q86VH4 590 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 AMZ2Q86W34 360 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 SYNPOQ8N3V7 929 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 LILRA3Q8N6C8 439 aaPredicted RBP8.69□□□□□ -1.02
CCDC47-207ENST00000612558 CFAP61Q8NHU2 1237 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 HM13Q8TCT9 377 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 ATL1Q8WXF7 558 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 KLK6Q92876 244 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 CMTM5Q96DZ9 223 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 GUCD1Q96NT3 240 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 KCNA7Q96RP8 456 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 NTMT1Q9BV86 223 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 DPEP2Q9H4A9 486 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 SLC32A1Q9H598 525 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 KLC4Q9NSK0 619 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 PRUNE2Q8WUY3 3088 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 ZFC3H1O60293 1989 aaKnown RBP8.69□□□□□ -1.02
CCDC47-207ENST00000612558 ARHGEF33A8MVX0 844 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 PIP5K1BO14986 540 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 KMOO15229 486 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 OR4F21O95013 312 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 EBLN1P0CF75 366 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 CHRNB1P11230 501 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 MYCLP1P12525 358 aaPredicted RBP8.69□□□□□ -1.02
CCDC47-207ENST00000612558 IL9P15248 144 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 NQO1P15559 274 aaKnown RBP8.69□□□□□ -1.02
CCDC47-207ENST00000612558 GABRG2P18507 467 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 ARL1P40616 181 aaPredicted RBP8.69□□□□□ -1.02
CCDC47-207ENST00000612558 SLC6A12P48065 614 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 TPMTP51580 245 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 DGKEP52429 567 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 PRKCQQ04759 706 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 KLF10Q13118 480 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 RPA4Q13156 261 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 TMEM198Q66K66 360 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 LARP4Q71RC2 724 aaKnown RBP eCLIP8.69□□□□□ -1.02
CCDC47-207ENST00000612558 LRRC70Q7Z2Q7 622 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 FAM124AQ86V42 546 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 DDIASQ8IXT1 998 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 KIF2BQ8N4N8 673 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 OXR1Q8N573 874 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 FBXO15Q8NCQ5 510 aaPredicted RBP8.69□□□□□ -1.02
CCDC47-207ENST00000612558 OR4F6Q8NGB9 312 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 OR52B6Q8NGF0 335 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 METTL6Q8TCB7 284 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 FBXL8Q96CD0 374 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 CCDC138Q96M89 665 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 BTBD10Q9BSF8 475 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 BTBD1Q9H0C5 482 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 TUBB1Q9H4B7 451 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 ZNF385DQ9H6B1 395 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 RMI1Q9H9A7 625 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 SGK2Q9HBY8 427 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 ITM2CQ9NQX7 267 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.69□□□□□ -1.025e-7■■■■□ 24.2
CCDC47-207ENST00000612558 MRPS17Q9Y2R5 130 aaKnown RBP8.69□□□□□ -1.02
CCDC47-207ENST00000612558 TIMM22Q9Y584 194 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 OR1A2Q9Y585 309 aa8.69□□□□□ -1.02
CCDC47-207ENST00000612558 LRRC72A6NJI9 287 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 B2RBV5 119 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 CHURC1-FNTBB4DL54 471 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 UBDO15205 165 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 SLC31A1O15431 190 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 GYG2O15488 501 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 C1orf105O95561 183 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 HOXC4P09017 264 aaPredicted RBP8.68□□□□□ -1.02
CCDC47-207ENST00000612558 LINC00032P0C843 101 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 HGFP14210 728 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 MAT2AP31153 395 aaKnown RBP8.68□□□□□ -1.02
CCDC47-207ENST00000612558 ACSL1P33121 698 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 IGFALSP35858 605 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 MAGEA9P43362 315 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 PPP2CBP62714 309 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 KCNJ2P63252 427 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 PPP2CAP67775 309 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 TRAF3Q13114 568 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 LRRC32Q14392 662 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 NFE2L1Q14494 772 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 NAA25Q14CX7 972 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 ZXDCQ2QGD7 858 aaPredicted RBP8.68□□□□□ -1.02
CCDC47-207ENST00000612558 PTCHD3Q3KNS1 767 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.68□□□□□ -1.02
CCDC47-207ENST00000612558 HABP4Q5JVS0 413 aaKnown RBP8.68□□□□□ -1.02
CCDC47-207ENST00000612558 LETMD1Q6P1Q0 360 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 LYPD4Q6UWN0 246 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 XKR5Q6UX68 686 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 SYT13Q7L8C5 426 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 TRIM69Q86WT6 500 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 DEFB123Q8N688 67 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 CDYL2Q8N8U2 506 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 DENND6BQ8NEG7 585 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 OR2T34Q8NGX1 318 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 HMGB4Q8WW32 186 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 C3orf30Q96M34 536 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 CATSPER2Q96P56 530 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 RAB3IPQ96QF0 476 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms