RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 STIP1P31948 543 aaKnown RBP17.14■□□□□ 0.33
SSBP1-215ENST00000612337 OTX2P32243 289 aa17.14■□□□□ 0.33
SSBP1-215ENST00000612337 DCDP81605 110 aaKnown RBP17.14■□□□□ 0.33
SSBP1-215ENST00000612337 INPP5JQ15735 1006 aaPredicted RBP17.14■□□□□ 0.33
SSBP1-215ENST00000612337 SLC5A12Q1EHB4 618 aa17.14■□□□□ 0.33
SSBP1-215ENST00000612337 C1orf189Q5VU69 101 aa17.14■□□□□ 0.33
SSBP1-215ENST00000612337 MLIPQ5VWP3 458 aa17.14■□□□□ 0.33
SSBP1-215ENST00000612337 TLDC1Q6P9B6 456 aa17.14■□□□□ 0.33
SSBP1-215ENST00000612337 AFTPHQ6ULP2 937 aa17.14■□□□□ 0.33
SSBP1-215ENST00000612337 MRGPREQ86SM8 312 aa17.14■□□□□ 0.33
SSBP1-215ENST00000612337 RBMXL3Q8N7X1 1067 aaKnown RBP17.14■□□□□ 0.33
SSBP1-215ENST00000612337 Q8NA96 180 aa17.14■□□□□ 0.33
SSBP1-215ENST00000612337 HDAC10Q969S8 669 aa17.14■□□□□ 0.33
SSBP1-215ENST00000612337 PNPLA2Q96AD5 504 aa17.14■□□□□ 0.33
SSBP1-215ENST00000612337 HES6Q96HZ4 224 aa17.14■□□□□ 0.33
SSBP1-215ENST00000612337 RANBP9Q96S59 729 aa17.14■□□□□ 0.33
SSBP1-215ENST00000612337 SLAMF7Q9NQ25 335 aa17.14■□□□□ 0.33
SSBP1-215ENST00000612337 GPN3Q9UHW5 284 aaPredicted RBP17.14■□□□□ 0.33
SSBP1-215ENST00000612337 PLAGL1Q9UM63 463 aa17.14■□□□□ 0.33
SSBP1-215ENST00000612337 SRPK3Q9UPE1 567 aa17.14■□□□□ 0.33
SSBP1-215ENST00000612337 ANKRD12Q6UB98 2062 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 ZSCAN9O15535 394 aaPredicted RBP17.13■□□□□ 0.33
SSBP1-215ENST00000612337 AGFG2O95081 481 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 GOT2P00505 430 aaKnown RBP17.13■□□□□ 0.33
SSBP1-215ENST00000612337 PEBP1P30086 187 aaKnown RBP17.13■□□□□ 0.33
SSBP1-215ENST00000612337 FDFT1P37268 417 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 KIR2DS3Q14952 304 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 OASLQ15646 514 aaKnown RBP17.13■□□□□ 0.33
SSBP1-215ENST00000612337 DNAJC21Q5F1R6 531 aaKnown RBP17.13■□□□□ 0.33
SSBP1-215ENST00000612337 TSTD2Q5T7W7 516 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 SLC6A19Q695T7 634 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 TMEM139Q8IV31 216 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 SLC22A15Q8IZD6 547 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 DNAJC22Q8N4W6 341 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 OR4L1Q8NH43 312 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 ATG4AQ8WYN0 398 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 FER1L6-AS2Q96M78 137 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 AP1M1Q9BXS5 423 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 MFRPQ9BY79 579 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 ETNK1Q9HBU6 452 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 C5AR2Q9P296 337 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 IMPACTQ9P2X3 320 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 SLC2A6Q9UGQ3 507 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 PLCL2Q9UPR0 1127 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 PTRH2Q9Y3E5 179 aaKnown RBP17.13■□□□□ 0.33
SSBP1-215ENST00000612337 HIVEP3Q5T1R4 2406 aa17.13■□□□□ 0.33
SSBP1-215ENST00000612337 NOTCH2Q04721 2471 aa17.12■□□□□ 0.33
SSBP1-215ENST00000612337 A0A0U1RQJ8 604 aa17.12■□□□□ 0.33
SSBP1-215ENST00000612337 ISM1B1AKI9 464 aa17.12■□□□□ 0.33
SSBP1-215ENST00000612337 IGHEP01854 428 aa17.12■□□□□ 0.33
SSBP1-215ENST00000612337 CTSBP07858 339 aa17.12■□□□□ 0.33
SSBP1-215ENST00000612337 ADRA1DP25100 572 aa17.12■□□□□ 0.33
SSBP1-215ENST00000612337 VARSP26640 1264 aaKnown RBP17.12■□□□□ 0.33
SSBP1-215ENST00000612337 FOLR3P41439 243 aa17.12■□□□□ 0.33
SSBP1-215ENST00000612337 RAB28P51157 221 aa17.12■□□□□ 0.33
SSBP1-215ENST00000612337 ACVR1Q04771 509 aa17.12■□□□□ 0.33
SSBP1-215ENST00000612337 PRR30Q53SZ7 412 aaPredicted RBP17.12■□□□□ 0.33
SSBP1-215ENST00000612337 VWA5B1Q5TIE3 1220 aa17.12■□□□□ 0.33
SSBP1-215ENST00000612337 PPP1R21Q6ZMI0 780 aa17.12■□□□□ 0.33
SSBP1-215ENST00000612337 ZNF534Q76KX8 674 aa17.12■□□□□ 0.33
SSBP1-215ENST00000612337 ZNF655Q8N720 491 aaPredicted RBP17.12■□□□□ 0.33
SSBP1-215ENST00000612337 OR2Y1Q8NGV0 311 aa17.12■□□□□ 0.33
SSBP1-215ENST00000612337 FRMD8P1Q9BZ68 369 aaPredicted RBP17.12■□□□□ 0.33
SSBP1-215ENST00000612337 TXLNGQ9NUQ3 528 aa17.12■□□□□ 0.33
SSBP1-215ENST00000612337 IFT80Q9P2H3 777 aaPredicted RBP17.12■□□□□ 0.33
SSBP1-215ENST00000612337 DHCR7Q9UBM7 475 aaKnown RBP17.12■□□□□ 0.33
SSBP1-215ENST00000612337 NDOR1Q9UHB4 597 aa17.12■□□□□ 0.33
SSBP1-215ENST00000612337 LIASO43766 372 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 PKLRP30613 574 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 CCR7P32248 378 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 PPARGP37231 505 aaPredicted RBP17.11■□□□□ 0.33
SSBP1-215ENST00000612337 GRIA1P42261 906 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 CSE1LP55060 971 aaKnown RBP17.11■□□□□ 0.33
SSBP1-215ENST00000612337 RAPSNQ13702 412 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 KYNUQ16719 465 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 FASTKD1Q53R41 847 aaKnown RBP17.11■□□□□ 0.33
SSBP1-215ENST00000612337 DCAF10Q5QP82 559 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 MRPL14Q6P1L8 145 aaKnown RBP17.11■□□□□ 0.33
SSBP1-215ENST00000612337 NLRP9Q7RTR0 991 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 CLEC1AQ8NC01 280 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 OR6P1Q8NGX9 317 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 ASZ1Q8WWH4 475 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 PEX13Q92968 403 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 PTERQ96BW5 349 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 ZNF778Q96MU6 729 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 DESI2Q9BSY9 194 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 NDC1Q9BTX1 674 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 MENTQ9BUN1 341 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 CARD6Q9BX69 1037 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 TSSK1BQ9BXA7 367 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 SLC29A3Q9BZD2 475 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 IRAK4Q9NWZ3 460 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 EURLQ9NYK6 297 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 LUZP4Q9P127 313 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 CDYLQ9Y232 598 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 CAPN6Q9Y6Q1 641 aa17.11■□□□□ 0.33
SSBP1-215ENST00000612337 E7EVH7 732 aa17.1■□□□□ 0.33
SSBP1-215ENST00000612337 PEX12O00623 359 aa17.1■□□□□ 0.33
SSBP1-215ENST00000612337 KLHL41O60662 606 aa17.1■□□□□ 0.33
SSBP1-215ENST00000612337 CNOT3O75175 753 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms