RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 WFIKKN2Q8TEU8 576 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 SLC13A3Q8WWT9 602 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 GLYATL1Q969I3 302 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 NXPE3Q969Y0 559 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 CGREF1Q99674 301 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 YIPF3Q9GZM5 350 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 PCDHGB4Q9UN71 923 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 PCDHGB5Q9Y5G0 923 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 C7orf72A4D263 438 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 FAM149AA5PLN7 773 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 GRXCR1A8MXD5 290 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 HOXC11O43248 304 aaPredicted RBP13.28□□□□□ -0.28
NEK3-205ENST00000610828 KCNH1O95259 989 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 HLA-EP13747 358 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 LBX1P52954 281 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 ABRQ12979 859 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 PWP1Q13610 501 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 SELPLGQ14242 412 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 GK3PQ14409 553 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 KIAA0040Q15053 153 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 AASDHQ4L235 1098 aaPredicted RBP13.28□□□□□ -0.28
NEK3-205ENST00000610828 LDLRAP1Q5SW96 308 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 ZBTB49Q6ZSB9 765 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 ADGRG5Q8IZF4 528 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 RASGEF1AQ8N9B8 481 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 TMEM159Q96B96 161 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 GBP5Q96PP8 586 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 SLC29A1Q99808 456 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 DNAJC11Q9NVH1 559 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 NFKBIL1Q9UBC1 381 aaPredicted RBP13.28□□□□□ -0.28
NEK3-205ENST00000610828 SNX6Q9UNH7 406 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 ZFC3H1O60293 1989 aaKnown RBP13.28□□□□□ -0.28
NEK3-205ENST00000610828 PRRT4C9JH25 899 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 QSOX1O00391 747 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 MAP3K13O43283 966 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 KIF1CO43896 1103 aaKnown RBP13.28□□□□□ -0.28
NEK3-205ENST00000610828 SLCO2B1O94956 709 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 RB1P06400 928 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 GPIP06744 558 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 PIM1P11309 404 aaPredicted RBP13.28□□□□□ -0.28
NEK3-205ENST00000610828 PSMC3P17980 439 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 MAP4P27816 1152 aaKnown RBP13.28□□□□□ -0.28
NEK3-205ENST00000610828 HTR1EP28566 365 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 SLC6A11P48066 632 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 MAPKAPK3Q16644 382 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 GGTA1PQ4G0N0 100 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 SPANXN4Q5MJ08 99 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 PRR23BQ6ZRT6 265 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 NEK10Q6ZWH5 1172 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 GOLM1Q8NBJ4 401 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 ZNF597Q96LX8 424 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 COQ6Q9Y2Z9 468 aa13.28□□□□□ -0.28
NEK3-205ENST00000610828 SAC3D1A6NKF1 404 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 WNT9AO14904 365 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 CLGNO14967 610 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 ATG13O75143 517 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 PGRP06401 933 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 CA3P07451 260 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 GSTM1P09488 218 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 BMP2P12643 396 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 BCKDHAP12694 445 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 FASP25445 335 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 HALP42357 657 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 PREPP48147 710 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 OR4D2P58180 307 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 GSTM4Q03013 218 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 PRKCQQ04759 706 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 TMEM115Q12893 351 aaPredicted RBP13.27□□□□□ -0.29
NEK3-205ENST00000610828 FNDC3BQ53EP0 1204 aaKnown RBP13.27□□□□□ -0.29
NEK3-205ENST00000610828 USP39Q53GS9 565 aaKnown RBP13.27□□□□□ -0.29
NEK3-205ENST00000610828 LILRA3Q8N6C8 439 aaPredicted RBP13.27□□□□□ -0.29
NEK3-205ENST00000610828 ANKFN1Q8N957 763 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 GLB1L3Q8NCI6 653 aaPredicted RBP13.27□□□□□ -0.29
NEK3-205ENST00000610828 HCAR2Q8TDS4 363 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 VPS35Q96QK1 796 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 MTIF3Q9H2K0 278 aaKnown RBP13.27□□□□□ -0.29
NEK3-205ENST00000610828 AGPAT4Q9NRZ5 378 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 VAPAQ9P0L0 249 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 CIDEBQ9UHD4 219 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 SLC27A6Q9Y2P4 619 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 V9GYQ6 96 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 ALPK3Q96L96 1907 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 XIRP2A4UGR9 3374 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 OTOL1A6NHN0 477 aaPredicted RBP13.27□□□□□ -0.29
NEK3-205ENST00000610828 H0YJX3 145 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 DFNA5O60443 496 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 PRNPP04156 253 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 IL6P05231 212 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 PBLDP30039 288 aaPredicted RBP13.27□□□□□ -0.29
NEK3-205ENST00000610828 VASPP50552 380 aaPredicted RBP13.27□□□□□ -0.29
NEK3-205ENST00000610828 PFN3P60673 137 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 FAM78AQ5JUQ0 283 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 FOXB2Q5VYV0 432 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 DNAJC14Q6Y2X3 702 aaPredicted RBP13.27□□□□□ -0.29
NEK3-205ENST00000610828 UBE2Q1Q7Z7E8 422 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 BPIFB1Q8TDL5 484 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 GTF2H4Q92759 462 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 FOXJ1Q92949 421 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 CLMPQ9H6B4 373 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 RPF2Q9H7B2 306 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms