RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 ASZ1Q8WWH4 475 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 DHRS4Q9BTZ2 278 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 NUDT9Q9BW91 350 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 CARD6Q9BX69 1037 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 AP1M1Q9BXS5 423 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 RAB6BQ9NRW1 208 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 PLAGL1Q9UM63 463 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 GUCA1BQ9UMX6 200 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 CDYLQ9Y232 598 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 MAP4K5Q9Y4K4 846 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 C9J4A7 227 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 KDM1AO60341 852 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 DPM1O60762 260 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 VPS4BO75351 444 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 GPC4O75487 556 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 SORBS2O94875 1100 aaKnown RBP7.34□□□□□ -1.23
CUX1-219ENST00000606749 APRTP07741 180 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 CD63P08962 238 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 ZSCAN5DPP0CG00 497 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 GNLYP22749 145 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 AOAHP28039 575 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 PEBP1P30086 187 aaKnown RBP7.34□□□□□ -1.23
CUX1-219ENST00000606749 CDC25BP30305 580 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 RPL22P35268 128 aaKnown RBP7.34□□□□□ -1.23
CUX1-219ENST00000606749 RRADP55042 308 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 PRAMEP78395 509 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 DCDP81605 110 aaKnown RBP7.34□□□□□ -1.23
CUX1-219ENST00000606749 HSPA14Q0VDF9 509 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 ATP1A4Q13733 1029 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 CCNG2Q16589 344 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 SLC5A12Q1EHB4 618 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 SYTL3Q4VX76 610 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 FASTKD1Q53R41 847 aaKnown RBP7.34□□□□□ -1.23
CUX1-219ENST00000606749 PCID2Q5JVF3 399 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 SEL1L2Q5TEA6 688 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 MEI1Q5TIA1 1274 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 JMJD6Q6NYC1 403 aaPredicted RBP7.34□□□□□ -1.23
CUX1-219ENST00000606749 TLDC1Q6P9B6 456 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 LDB1Q86U70 411 aaPredicted RBP7.34□□□□□ -1.23
CUX1-219ENST00000606749 RAB43Q86YS6 212 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 MCATQ8IVS2 390 aaKnown RBP7.34□□□□□ -1.23
CUX1-219ENST00000606749 C2orf73Q8N5S3 287 aaPredicted RBP7.34□□□□□ -1.23
CUX1-219ENST00000606749 ZNF655Q8N720 491 aaPredicted RBP7.34□□□□□ -1.23
CUX1-219ENST00000606749 EFCAB3Q8N7B9 438 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 RBMXL3Q8N7X1 1067 aaKnown RBP7.34□□□□□ -1.23
CUX1-219ENST00000606749 CCDC89Q8N998 374 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 LINC01555Q8NAE3 123 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 GALNT11Q8NCW6 608 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 CFAP61Q8NHU2 1237 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 PROKR1Q8TCW9 393 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 LKAAEAR1Q8TD35 194 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 PEX13Q92968 403 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 GBP5Q96PP8 586 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 PSMG3-AS1Q96PY0 264 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 SMAD5Q99717 465 aaKnown RBP7.34□□□□□ -1.23
CUX1-219ENST00000606749 C17orf62Q9BQA9 187 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 MENTQ9BUN1 341 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 TSGA10Q9BZW7 698 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 CHRAC1Q9NRG0 131 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 GPR83Q9NYM4 423 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 PAK5Q9P286 719 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 DHCR7Q9UBM7 475 aaKnown RBP7.34□□□□□ -1.23
CUX1-219ENST00000606749 GPN3Q9UHW5 284 aaPredicted RBP7.34□□□□□ -1.23
CUX1-219ENST00000606749 ANAPC5Q9UJX4 755 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 VPS4AQ9UN37 437 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 PLCL2Q9UPR0 1127 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 DRG1Q9Y295 367 aaKnown RBP7.34□□□□□ -1.23
CUX1-219ENST00000606749 PADI2Q9Y2J8 665 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 TCAF1Q9Y4C2 921 aa7.34□□□□□ -1.23
CUX1-219ENST00000606749 PCSK5Q92824 1860 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 PRMT5O14744 637 aaPredicted RBP7.33□□□□□ -1.24
CUX1-219ENST00000606749 CD3EAPO15446 510 aaKnown RBP7.33□□□□□ -1.24
CUX1-219ENST00000606749 ZSCAN9O15535 394 aaPredicted RBP7.33□□□□□ -1.24
CUX1-219ENST00000606749 KRT86O43790 486 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 CNOT3O75175 753 aaKnown RBP7.33□□□□□ -1.24
CUX1-219ENST00000606749 APOA4P06727 396 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 GP1BBP13224 206 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 CD9P21926 228 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 ALAS2P22557 587 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 PKLRP30613 574 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 OTX2P32243 289 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 GRIA3P42263 894 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 UQCRFS1P47985 274 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 TTPAP49638 278 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 RAB28P51157 221 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 FOXL2P58012 376 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 CRADDP78560 199 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 RAPSNQ13702 412 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 GRB7Q14451 532 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 RPS6KA1Q15418 735 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 SIX1Q15475 284 aaPredicted RBP7.33□□□□□ -1.24
CUX1-219ENST00000606749 INPP5JQ15735 1006 aaPredicted RBP7.33□□□□□ -1.24
CUX1-219ENST00000606749 NKAIN1Q4KMZ8 207 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 MRPL14Q6P1L8 145 aaKnown RBP7.33□□□□□ -1.24
CUX1-219ENST00000606749 DRICH1Q6PGQ1 229 aaPredicted RBP7.33□□□□□ -1.24
CUX1-219ENST00000606749 FIGLAQ6QHK4 219 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 MRGPREQ86SM8 312 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 HPS6Q86YV9 775 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 KRT222Q8N1A0 295 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 LMNTD1Q8N9Z9 388 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms