RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 MED13LQ71F56 2210 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PIKFYVEQ9Y2I7 2098 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SPTBP11277 2137 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 C17orf113A0A1B0GUU1 675 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 C2orf72A6NCS6 295 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 APOL1O14791 398 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SNPHO15079 494 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SRP72O76094 671 aaKnown RBP11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 USP1O94782 785 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PROSCO94903 275 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CLDN14O95500 239 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 HPP00738 406 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CRYABP02511 175 aaKnown RBP11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 ALBP02768 609 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 RALBP11234 206 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 ESRRAP11474 423 aaPredicted RBP11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 ACPPP15309 386 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 NFKB1P19838 968 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PTPN3P26045 913 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SHMT2P34897 504 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SOX11P35716 441 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SLC5A12Q1EHB4 618 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 TEX44Q53QW1 395 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 UNC5AQ6ZN44 842 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 KBTBD2Q8IY47 623 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 METTL27Q8N6F8 245 aaPredicted RBP11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 IPMKQ8NFU5 416 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 FLVCR1-AS1Q8TAF5 88 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CCDC110Q8TBZ0 833 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 TFGQ92734 400 aaPredicted RBP11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 MRGPRX2Q96LB1 330 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 TEKT5Q96M29 485 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SPOCK3Q9BQ16 436 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CRB3Q9BUF7 120 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 HSD3B7Q9H2F3 369 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SEMA3GQ9NS98 782 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 EURLQ9NYK6 297 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 FKBPLQ9UIM3 349 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CRLS1Q9UJA2 301 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 ARL5AQ9Y689 179 aa11.29□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CFAP99D6REC4 459 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 MAP2K7O14733 419 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 RASAL1O95294 804 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 EPOP01588 193 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 UQCRHP07919 91 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PIM1P11309 404 aaPredicted RBP11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 KDELR1P24390 212 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CD68P34810 354 aaPredicted RBP11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CD151P48509 253 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 ART1P52961 327 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 DYNLT1P63172 113 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SLC1A5Q15758 541 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 ZNF658BQ4V348 819 aaPredicted RBP11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SLC9A4Q6AI14 798 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PRSS58Q8IYP2 241 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SIRT6Q8N6T7 355 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 OR5AR1Q8NGP9 310 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 BRIX1Q8TDN6 353 aaKnown RBP11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 C8orf44Q96CB5 159 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 OXNAD1Q96HP4 312 aaPredicted RBP11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 MAGED4Q96JG8 741 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 COPS8Q99627 209 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CUTCQ9NTM9 273 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 KLHL20Q9Y2M5 609 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SEC16AO15027 2179 aa11.28□□□□□ -0.6
PDLIM1P1-201ENST00000604187 DSCR3O14972 297 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 FANCGO15287 622 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 WISP2O76076 250 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ONECUT2O95948 504 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 PRR35P0CG20 571 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ATP1B2P14415 290 aaPredicted RBP11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 OR1D4P47884 311 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ARSFP54793 590 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 FANCCQ00597 558 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 PMP22Q01453 160 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ZNF449Q6P9G9 518 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 MEX3BQ6ZN04 569 aaKnown RBP11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 NCCRP1Q6ZVX7 275 aaPredicted RBP11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 NLRP9Q7RTR0 991 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 MCATQ8IVS2 390 aaKnown RBP11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 OR4K2Q8NGD2 314 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 DNAJB8Q8NHS0 232 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 DENND1AQ8TEH3 1009 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 PSMF1Q92530 271 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 FAM96AQ9H5X1 160 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 OR6C2Q9NZP2 312 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 CTTNBP2NLQ9P2B4 639 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 PLAGL1Q9UM63 463 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ACANP16112 2415 aa11.27□□□□□ -0.61
PDLIM1P1-201ENST00000604187 NSG1A0A0A6YYJ2 146 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 C3orf70A6NLC5 250 aaPredicted RBP11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 VSTM2BA6NLU5 285 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ISM1B1AKI9 464 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 PRAMEF2O60811 474 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 WDPCPO95876 746 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 SERPINA7P05543 415 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 TPBGLP0DKB5 382 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 CD99P14209 185 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 MAGP20916 626 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms