RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 SIRPGQ9P1W8 387 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 SLC17A7Q9P2U7 560 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 OPTCQ9UBM4 332 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 SPASTQ9UBP0 616 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 WARS2Q9UGM6 360 aaKnown RBP8.7□□□□□ -1.02
COMMD3-215ENST00000602574 NUFIP1Q9UHK0 495 aaKnown RBP8.7□□□□□ -1.02
COMMD3-215ENST00000602574 TNFSF13BQ9Y275 285 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 DLGAP4Q9Y2H0 992 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 PCDHB7Q9Y5E2 793 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 NUBP2Q9Y5Y2 271 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 GLI3P10071 1580 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 NEDD8-MDP1E9PL57 170 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 MASP2O00187 686 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 XYLBO75191 536 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 RLN2P04090 185 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 UQCRFS1P1P0C7P4 283 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 PLS3P13797 630 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 PFKLP17858 780 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 FPR3P25089 353 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 CCR7P32248 378 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 CD96P40200 585 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 HNMTP50135 292 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 NR0B1P51843 470 aaKnown RBP8.7□□□□□ -1.02
COMMD3-215ENST00000602574 EPHA5P54756 1037 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 FSTL1Q12841 308 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 ORC2Q13416 577 aaPredicted RBP8.7□□□□□ -1.02
COMMD3-215ENST00000602574 MTM1Q13496 603 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 PLCL1Q15111 1095 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 ADPRMQ3LIE5 342 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 BCL7AQ4VC05 210 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 MLIPQ5VWP3 458 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 RPL13AP3Q6NVV1 102 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 COPS6Q7L5N1 327 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 HSD17B13Q7Z5P4 300 aaPredicted RBP8.7□□□□□ -1.02
COMMD3-215ENST00000602574 SPRED1Q7Z699 444 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 DENND6AQ8IWF6 608 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 VWA5B2Q8N398 1253 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 PARP16Q8N5Y8 322 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 LRRC17Q8N6Y2 441 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 DENND6BQ8NEG7 585 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 NDNFQ8TB73 568 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 MTERF3Q96E29 417 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 YIPF6Q96EC8 236 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 PLA2G12BQ9BX93 195 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 ACTR6Q9GZN1 396 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 HEXA-AS1Q9H8Q6 139 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 ALG13Q9NP73 1137 aaKnown RBP8.7□□□□□ -1.02
COMMD3-215ENST00000602574 SARDHQ9UL12 918 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 ZNRF3Q9ULT6 936 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 SHOC2Q9UQ13 582 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 PEX16Q9Y5Y5 336 aa8.7□□□□□ -1.02
COMMD3-215ENST00000602574 ALS2Q96Q42 1657 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 A0A1W2PPM1 405 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 BCLAF3A2AJT9 711 aaKnown RBP8.69□□□□□ -1.02
COMMD3-215ENST00000602574 FAM234BA2RU67 622 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 RGSL1A5PLK6 1076 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 TMEM191CA6NGB0 347 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 G3V2T6 193 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 H3BQ06 376 aaPredicted RBP8.69□□□□□ -1.02
COMMD3-215ENST00000602574 SLC28A1O00337 649 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 MRPS14O60783 128 aaKnown RBP8.69□□□□□ -1.02
COMMD3-215ENST00000602574 LRCH4O75427 683 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 MED6O75586 246 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 USP17L8P0C7I0 530 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 CBSLP0DN79 551 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 PAICSP22234 425 aaKnown RBP8.69□□□□□ -1.02
COMMD3-215ENST00000602574 CPN2P22792 545 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 PAX6P26367 422 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 CBSP35520 551 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 GSK3AP49840 483 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 RBP2P50120 134 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 VASPP50552 380 aaPredicted RBP8.69□□□□□ -1.02
COMMD3-215ENST00000602574 ARPP19P56211 112 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 KIAA1024LP59773 190 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 CSTF1Q05048 431 aaKnown RBP8.69□□□□□ -1.02
COMMD3-215ENST00000602574 ATP6AP1Q15904 470 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 UGT3A2Q3SY77 523 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 FLYWCH1Q4VC44 716 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 ATP13A5Q4VNC0 1218 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 SLC39A12Q504Y0 691 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 MTX3Q5HYI7 312 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 C1orf185Q5T7R7 199 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 CENPPQ6IPU0 288 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 ZC3H14Q6PJT7 736 aaKnown RBP8.69□□□□□ -1.02
COMMD3-215ENST00000602574 DPP8Q6V1X1 898 aaPredicted RBP8.69□□□□□ -1.02
COMMD3-215ENST00000602574 FAM183BPQ6ZVS7 135 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 SHFQ7M4L6 423 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 TRMT11Q7Z4G4 463 aaKnown RBP8.69□□□□□ -1.02
COMMD3-215ENST00000602574 MON1AQ86VX9 555 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 TPRA1Q86W33 373 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 MICU3Q86XE3 530 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 DHRSXQ8N5I4 330 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 MEIOBQ8N635 442 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 R3HDM4Q96D70 268 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 OR2A14Q96R47 310 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 PIGSQ96S52 555 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 ZNF559Q9BR84 538 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 PDZD7Q9H5P4 517 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 NFKBIL1Q9UBC1 381 aaPredicted RBP8.69□□□□□ -1.02
COMMD3-215ENST00000602574 DNAJB9Q9UBS3 223 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms