RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 UNC79Q9P2D8 2635 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 GOLGA6L9A6NEM1 432 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 MASP2O00187 686 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 ZSCAN9O15535 394 aaPredicted RBP17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 SUN1O94901 812 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 ITGAXP20702 1163 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 CCR7P32248 378 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 SOX8P57073 446 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 PLOD1Q02809 727 aaPredicted RBP17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 ACVR1Q04771 509 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 GRB7Q14451 532 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 EIF2S3LQ2VIR3 472 aaKnown RBP17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 DCAF10Q5QP82 559 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 IGFL3Q6UXB1 125 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 ZNF534Q76KX8 674 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 PEX26Q7Z412 305 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 PPP1R32Q7Z5V6 425 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 VRK3Q8IV63 474 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 FAM20CQ8IXL6 584 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 ZNF655Q8N720 491 aaPredicted RBP17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 LINC01555Q8NAE3 123 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 HDAC10Q969S8 669 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 SNRNP40Q96DI7 357 aaKnown RBP17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 ZNF778Q96MU6 729 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 C17orf62Q9BQA9 187 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 AP1M1Q9BXS5 423 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 ZNF552Q9H707 407 aaPredicted RBP17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 CUEDC1Q9NWM3 386 aaPredicted RBP17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 RIMKLBQ9ULI2 386 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 G3BP2Q9UN86 482 aaKnown RBP17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 TDRKHQ9Y2W6 561 aaKnown RBP17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 PTRH2Q9Y3E5 179 aaKnown RBP17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 ICE1Q9Y2F5 2266 aa17.33■□□□□ 0.36
CHMP2A-208ENST00000601220 RP1L1Q8IWN7 2480 aaPredicted RBP17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 MIF4GDA9UHW6 222 aaKnown RBP17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 KRT86O43790 486 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 GPC4O75487 556 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 ONECUT2O95948 504 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 GOT2P00505 430 aaKnown RBP17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 OR56A5P0C7T3 313 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 PKLRP30613 574 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 GRIA1P42261 906 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 SEMA3AQ14563 771 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 KIR2DS3Q14952 304 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 KYNUQ16719 465 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 NKAIN1Q4KMZ8 207 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 TLDC1Q6P9B6 456 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 LINC00523Q86TU6 105 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 HOOK3Q86VS8 718 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 TMEM139Q8IV31 216 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 SLC22A15Q8IZD6 547 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 GALNT16Q8N428 558 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 UBL4BQ8N7F7 174 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 LMNTD1Q8N9Z9 388 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 HES6Q96HZ4 224 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 FER1L6-AS2Q96M78 137 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 ALS2CR12Q96Q35 445 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 ETNK1Q9HBU6 452 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 P4HTMQ9NXG6 502 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 IFT80Q9P2H3 777 aaPredicted RBP17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 IMPACTQ9P2X3 320 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 PLCL2Q9UPR0 1127 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 KLHL20Q9Y2M5 609 aa17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 SPTBN1Q01082 2364 aaKnown RBP17.32■□□□□ 0.36
CHMP2A-208ENST00000601220 WIPF3A6NGB9 483 aa17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 CBX6O95503 412 aa17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 FTCDO95954 541 aa17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 CD63P08962 238 aa17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 VARSP26640 1264 aaKnown RBP17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 FOLR3P41439 243 aa17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 CDH17Q12864 832 aa17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 MYBPC3Q14896 1274 aa17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 SLC9A5Q14940 896 aa17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 OASLQ15646 514 aaKnown RBP17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 DNAJC21Q5F1R6 531 aaKnown RBP17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 TSTD2Q5T7W7 516 aa17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 LYPLAL1Q5VWZ2 237 aa17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 LKAAEAR1Q8TD35 194 aa17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 N4BP2L2Q92802 583 aaPredicted RBP17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 INPP5DQ92835 1189 aa17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 PTERQ96BW5 349 aa17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 RANBP9Q96S59 729 aa17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 BARD1Q99728 777 aaKnown RBP17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 ZBTB20Q9HC78 741 aaPredicted RBP17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 ENAMQ9NRM1 1142 aa17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 EURLQ9NYK6 297 aa17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 GPN3Q9UHW5 284 aaPredicted RBP17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 SRPK3Q9UPE1 567 aa17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 FER1L5A0AVI2 2057 aa17.31■□□□□ 0.36
CHMP2A-208ENST00000601220 HEATR9A2RTY3 570 aa17.3■□□□□ 0.36
CHMP2A-208ENST00000601220 ERI2A8K979 691 aaKnown RBP17.3■□□□□ 0.36
CHMP2A-208ENST00000601220 ISM1B1AKI9 464 aa17.3■□□□□ 0.36
CHMP2A-208ENST00000601220 IPO7O95373 1038 aaKnown RBP17.3■□□□□ 0.36
CHMP2A-208ENST00000601220 STIP1P31948 543 aaKnown RBP17.3■□□□□ 0.36
CHMP2A-208ENST00000601220 RAB28P51157 221 aa17.3■□□□□ 0.36
CHMP2A-208ENST00000601220 OR4L1Q8NH43 312 aa17.3■□□□□ 0.36
CHMP2A-208ENST00000601220 ATG4AQ8WYN0 398 aa17.3■□□□□ 0.36
CHMP2A-208ENST00000601220 CARD6Q9BX69 1037 aa17.3■□□□□ 0.36
CHMP2A-208ENST00000601220 CASS4Q9NQ75 786 aa17.3■□□□□ 0.36
CHMP2A-208ENST00000601220 ASF1BQ9NVP2 202 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms