RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 AHSGP02765 367 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 EBLN1P0CF75 366 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 CBSLP0DN79 551 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 UGT2B7P16662 529 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 CBSP35520 551 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 BDKRB1P46663 353 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 UCNP55089 124 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 SLC7A5Q01650 507 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 ACY1Q03154 408 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 TUBB3Q13509 450 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 GRB7Q14451 532 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 KCNAB1Q14722 419 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 TGIF1Q15583 401 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 KLHL38Q2WGJ6 581 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 TMTC4Q5T4D3 741 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 UGT3A1Q6NUS8 523 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 SPESP1Q6UW49 350 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 DTX1Q86Y01 620 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 MMGT1Q8N4V1 131 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 RAB42Q8N4Z0 105 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 FBXO25Q8TCJ0 367 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 CD200R1Q8TD46 325 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 NDNQ99608 321 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 MENTQ9BUN1 341 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 RAB11FIP5Q9BXF6 653 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 PHACTR1Q9C0D0 580 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 PDE7BQ9NP56 450 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 WDR70Q9NW82 654 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 SPHK1Q9NYA1 384 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 MOCS1Q9NZB8 636 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 ZFATQ9P243 1243 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 SLC17A6Q9P2U8 582 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 CIDEBQ9UHD4 219 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 SLC39A10Q9ULF5 831 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 CORO1CQ9ULV4 474 aaPredicted RBP16.31■□□□□ 0.2
TRIM28-215ENST00000601150 BTRCQ9Y297 605 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 SSUH2Q9Y2M2 353 aa16.31■□□□□ 0.2
TRIM28-215ENST00000601150 CTAGE15A4D2H0 777 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 ISM1B1AKI9 464 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 RASGRF2O14827 1237 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 MAP3K7O43318 606 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 CTAGE8P0CG41 777 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 MPC1LP0DKB6 136 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 FGF5P12034 268 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 ENO3P13929 434 aaPredicted RBP16.3■□□□□ 0.2
TRIM28-215ENST00000601150 FOLR1P15328 257 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 CD9P21926 228 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 SKIV2L2P42285 1042 aaKnown RBP16.3■□□□□ 0.2
TRIM28-215ENST00000601150 TMPRSS3P57727 454 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 CUL1Q13616 776 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 KIR2DS3Q14952 304 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 TRADDQ15628 312 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 ZDHHC24Q6UX98 284 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 CTAGE6Q86UF2 777 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 BPHLQ86WA6 291 aaPredicted RBP16.3■□□□□ 0.2
TRIM28-215ENST00000601150 CTAGE4Q8IX94 777 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 PALM2Q8IXS6 379 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 OR2L8Q8NGY9 312 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 OR2A14Q96R47 310 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 SPRY4Q9C004 299 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 FAM114A2Q9NRY5 505 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 FGF21Q9NSA1 209 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 TAS2R13Q9NYV9 303 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 TRMT6Q9UJA5 497 aaKnown RBP16.3■□□□□ 0.2
TRIM28-215ENST00000601150 AHCTF1Q8WYP5 2266 aa16.3■□□□□ 0.2
TRIM28-215ENST00000601150 EIF3FO00303 357 aaPredicted RBP16.29■□□□□ 0.2
TRIM28-215ENST00000601150 PSIP1O75475 530 aaKnown RBP16.29■□□□□ 0.2
TRIM28-215ENST00000601150 STK17BO94768 372 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 CATP04040 527 aaKnown RBP16.29■□□□□ 0.2
TRIM28-215ENST00000601150 ST6GAL1P15907 406 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 ATP1A2P50993 1020 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 SLC5A12Q1EHB4 618 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 CCSMST1Q4G0I0 132 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.29■□□□□ 0.2
TRIM28-215ENST00000601150 RBM20Q5T481 1227 aaKnown RBP16.29■□□□□ 0.2
TRIM28-215ENST00000601150 SLC26A11Q86WA9 606 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 CCDC25Q86WR0 208 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 PPP1R3BQ86XI6 285 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 RASGRP3Q8IV61 690 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 CPNE9Q8IYJ1 553 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 LINC01555Q8NAE3 123 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 FLVCR1-AS1Q8TAF5 88 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 NKD1Q969G9 470 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 SLC22A18Q96BI1 424 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 ELMO2Q96JJ3 720 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 IL17FQ96PD4 163 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 TRAPPC9Q96Q05 1148 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 CCNL2Q96S94 520 aaPredicted RBP16.29■□□□□ 0.2
TRIM28-215ENST00000601150 ULBP3Q9BZM4 244 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 SPATA7Q9P0W8 599 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 PILRAQ9UKJ1 303 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 RARRES3Q9UL19 164 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 LHX6Q9UPM6 363 aa16.29■□□□□ 0.2
TRIM28-215ENST00000601150 TMEM184BQ9Y519 407 aaPredicted RBP16.29■□□□□ 0.2
TRIM28-215ENST00000601150 PCM1Q15154 2024 aa16.28■□□□□ 0.2
TRIM28-215ENST00000601150 A0A0J9YY10 115 aa16.28■□□□□ 0.2
TRIM28-215ENST00000601150 ESYT3A0FGR9 886 aa16.28■□□□□ 0.2
TRIM28-215ENST00000601150 ARHGEF33A8MVX0 844 aa16.28■□□□□ 0.2
TRIM28-215ENST00000601150 RAD1O60671 282 aa16.28■□□□□ 0.2
TRIM28-215ENST00000601150 SPAG6O75602 509 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms