RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 OGFOD3Q6PK18 319 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 C17orf82Q86X59 251 aaPredicted RBP22.28■■□□□ 1.16
IRF3-227ENST00000600911 LRRC56Q8IYG6 542 aaPredicted RBP22.28■■□□□ 1.16
IRF3-227ENST00000600911 FBXO39Q8N4B4 442 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 OR9A1PQ8NGU1 263 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 RDH11Q8TC12 318 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 MCOLN3Q8TDD5 553 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 ZNF480Q8WV37 535 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 NSUN5Q96P11 429 aaKnown RBP22.28■■□□□ 1.16
IRF3-227ENST00000600911 EGFL8Q99944 293 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 CPNE7Q9UBL6 633 aa22.28■■□□□ 1.16
IRF3-227ENST00000600911 PCM1Q15154 2024 aa22.27■■□□□ 1.16
IRF3-227ENST00000600911 SYCE1LA8MT33 242 aa22.27■■□□□ 1.16
IRF3-227ENST00000600911 PPM1DO15297 605 aa22.27■■□□□ 1.16
IRF3-227ENST00000600911 HSPA7P48741 367 aa22.27■■□□□ 1.16
IRF3-227ENST00000600911 PRKAA2P54646 552 aa22.27■■□□□ 1.16
IRF3-227ENST00000600911 CDKL1Q00532 357 aa22.27■■□□□ 1.16
IRF3-227ENST00000600911 NFKB2Q00653 900 aa22.27■■□□□ 1.16
IRF3-227ENST00000600911 SETDB1Q15047 1291 aa22.27■■□□□ 1.16
IRF3-227ENST00000600911 ARL14Q8N4G2 192 aa22.27■■□□□ 1.16
IRF3-227ENST00000600911 LINC01555Q8NAE3 123 aa22.27■■□□□ 1.16
IRF3-227ENST00000600911 OR6Y1Q8NGX8 325 aa22.27■■□□□ 1.16
IRF3-227ENST00000600911 PYCR2Q96C36 320 aa22.27■■□□□ 1.16
IRF3-227ENST00000600911 CXorf40BQ96DE9 158 aa22.27■■□□□ 1.16
IRF3-227ENST00000600911 GATA5Q9BWX5 397 aaPredicted RBP22.27■■□□□ 1.16
IRF3-227ENST00000600911 SLC40A1Q9NP59 571 aa22.27■■□□□ 1.16
IRF3-227ENST00000600911 ICKQ9UPZ9 632 aa22.27■■□□□ 1.16
IRF3-227ENST00000600911 CSNK1G3Q9Y6M4 447 aa22.27■■□□□ 1.16
IRF3-227ENST00000600911 CASC3O15234 703 aaKnown RBP22.26■■□□□ 1.15
IRF3-227ENST00000600911 IPO13O94829 963 aaKnown RBP22.26■■□□□ 1.15
IRF3-227ENST00000600911 SYPP08247 313 aa22.26■■□□□ 1.15
IRF3-227ENST00000600911 MAP4P27816 1152 aaKnown RBP22.26■■□□□ 1.15
IRF3-227ENST00000600911 CCT8P50990 548 aa22.26■■□□□ 1.15
IRF3-227ENST00000600911 GPR18Q14330 331 aa22.26■■□□□ 1.15
IRF3-227ENST00000600911 UNC50Q53HI1 259 aa22.26■■□□□ 1.15
IRF3-227ENST00000600911 C6orf132Q5T0Z8 1188 aa22.26■■□□□ 1.15
IRF3-227ENST00000600911 IL27RAQ6UWB1 636 aa22.26■■□□□ 1.15
IRF3-227ENST00000600911 SLC35F3Q8IY50 421 aa22.26■■□□□ 1.15
IRF3-227ENST00000600911 GPR156Q8NFN8 814 aa22.26■■□□□ 1.15
IRF3-227ENST00000600911 FBXL8Q96CD0 374 aa22.26■■□□□ 1.15
IRF3-227ENST00000600911 PITPNM3Q9BZ71 974 aa22.26■■□□□ 1.15
IRF3-227ENST00000600911 C20orf27Q9GZN8 174 aa22.26■■□□□ 1.15
IRF3-227ENST00000600911 MVB12BQ9H7P6 319 aa22.26■■□□□ 1.15
IRF3-227ENST00000600911 BTBD3Q9Y2F9 522 aa22.26■■□□□ 1.15
IRF3-227ENST00000600911 LY6G6EA0A0G2JKS1 128 aa22.25■■□□□ 1.15
IRF3-227ENST00000600911 PPP6CO00743 305 aa22.25■■□□□ 1.15
IRF3-227ENST00000600911 CDX4O14627 284 aaPredicted RBP22.25■■□□□ 1.15
IRF3-227ENST00000600911 SMIM24O75264 130 aa22.25■■□□□ 1.15
IRF3-227ENST00000600911 CER1O95813 267 aa22.25■■□□□ 1.15
IRF3-227ENST00000600911 ANXA5P08758 320 aa22.25■■□□□ 1.15
IRF3-227ENST00000600911 ZNF806P0C7X5 589 aa22.25■■□□□ 1.15
IRF3-227ENST00000600911 TSPAN8P19075 237 aa22.25■■□□□ 1.15
IRF3-227ENST00000600911 TGM1P22735 817 aa22.25■■□□□ 1.15
IRF3-227ENST00000600911 EEF1DP29692 281 aaKnown RBP22.25■■□□□ 1.15
IRF3-227ENST00000600911 TAX1BP1Q86VP1 789 aa22.25■■□□□ 1.15
IRF3-227ENST00000600911 NUDCD3Q8IVD9 361 aa22.25■■□□□ 1.15
IRF3-227ENST00000600911 RAD51AP1Q96B01 352 aa22.25■■□□□ 1.15
IRF3-227ENST00000600911 KIR3DX1Q9H7L2 352 aa22.25■■□□□ 1.15
IRF3-227ENST00000600911 U3KQA8 63 aa22.25■■□□□ 1.15
IRF3-227ENST00000600911 ASXL3Q9C0F0 2248 aa22.25■■□□□ 1.15
IRF3-227ENST00000600911 KIR2DS5A0A0G2JLQ3 304 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 A0A0G2JNG1 304 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 CCDC189A1A4V9 331 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 KIR2DS3K7RE56 304 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 HIST1H2AGP0C0S8 130 aaPredicted RBP22.24■■□□□ 1.15
IRF3-227ENST00000600911 ERGP11308 486 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 TAC1P20366 129 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 HIST1H2ADP20671 130 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 SLC6A12P48065 614 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 ALDH18A1P54886 795 aaKnown RBP22.24■■□□□ 1.15
IRF3-227ENST00000600911 AP1S2P56377 157 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 YBX1P67809 324 aaKnown RBP22.24■■□□□ 1.15
IRF3-227ENST00000600911 KIR2DS5Q14953 304 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 CHI3L2Q15782 390 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 ZNF678Q5SXM1 525 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.24■■□□□ 1.15
IRF3-227ENST00000600911 LIPMQ5VYY2 423 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 AGTRAPQ6RW13 159 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 ARFGAP2Q8N6H7 521 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 HIST1H2AHQ96KK5 128 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 CCDC138Q96M89 665 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 HIST1H2AJQ99878 128 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 H2AFJQ9BTM1 129 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 WWOXQ9NZC7 414 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 RAPGEFL1Q9UHV5 662 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 ASCC3Q8N3C0 2202 aaKnown RBP22.24■■□□□ 1.15
IRF3-227ENST00000600911 A0A1B0GTL3 188 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 BIRC5O15392 142 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 ITM2AO43736 263 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 VIPP01282 170 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 RPS17P08708 135 aaKnown RBP22.24■■□□□ 1.15
IRF3-227ENST00000600911 MAPK9P45984 424 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 NAGLUP54802 743 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 HHEXQ03014 270 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 KRT33BQ14525 404 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 PTCHD3Q3KNS1 767 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 SULT1C3Q6IMI6 304 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 SUSD1Q6UWL2 747 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 SDR16C5Q8N3Y7 309 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 MAPK15Q8TD08 544 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms